Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05647 ATGGAGGAACTGCAAAGAGCACTGAAGAATTGTAATCTAACAGTTAACACCGTCTCAGAAAAGGGTCGTTCTCTTTTTACTACTAGGGATTTCTACCCAGGAGAAGTGATTGTTAGCCAAGAGCCATATGTTTGTGTTCCAACCCAAAAAAGGTGTGATGGATGTTTCTCAACAACTAACCTTAGCAAATGCTCACGTTGTCAAGTTGTTTGGTATTGCGGAACACCATGTCAGAAATCGGAGTGGAAGTTGCATCGTCTTGAATGTCAAGCACTCTCAAGGCTAGACACCAACAAGAGAAAATCTGTTACACCGTCGATACGGTTGATGCTCAAACTATATCTTCGAAGGAAGCTGCAAGATGAGAAGATCATTCCAAGCACTGCTATGGACAACTACAAGTTAGTGGAGGCATTAGTGGCTCACATGTCTGACATCAAAGAGGAGCAGCTGGTGTTGTATGCACAGATGGCTAATCTTGTACACTTAATACTACAATGGCCTGAAATCAATATTAAAGAGATTGCAGAAATTTTTTCCAAGTTTGCATGTAATGCGCATACCATTTGTGACAGTGAGTTAAGACCTCTGGGAACAGGATTGTATCCTGTTGTTTCCATTATCAATCACAGCTGCTTGCCCAATTCAGTATTGGTTTTTGATGGAAGGGTAGCATCCGTACGTGCTATGCAACATGTGCCTAAAGGGACCGAGGTATTGATAAGTTATATAGAGACAGCTGGAAGCACTGTGACTCGACAAAAGGCCCTCAAAGAGCAGTACCTATTCACTTGTGTTTGTCCCCTCTGTTCCAAAGTGGGTCAGTATGAAGATGTTCAAGAAAATGCAATTCTAGAAGGATACAGATGCAAAAATGAAACATGTGATGGTTTCTTGCTCCGCACAACTGATGGGAAAGCGTTTCAATGCCAAGAATGTGGGTTAGTTAGAGACAAGGAAGAGATAAAGCAAATTGCAACTGAAATAAAATTTCTATCAGAAGAAGCTTCTAAGCCTTCTTCTAGTGGCAATTATCATGAAGCTATTTCCATATATAAAATGATCGAGAAACTGCAAACAAAACTATATCATCCTTTCTCGATCAATTTGATGCAAACACGTGAGACAATTTTGAAGTCATTAATGAAGCTGGAATGTTGGAGAGAAGCTTTAGCATATTGCAAATTGACCATACCAATCTATCAAAGAGTGTATCCAGCTGTTCACCCCTTGCTTGGCTTGCAATATTATACTTGTGGAAAACTTGAATGGTATCTTGGAGACACGGAGGAAGCTGTTAAATCATTGACGAAGGCTGTGGATATACTAAGGATTACTCATGGTACAAAGACTCCATTTGTGAAGGAACTATTGATGATGTTGGAGGAAGCCCGTGCAGAAGCCTCTTACAAATTGTCCTCTAAAGAAGAGTAG 1434 0.4045 MEELQRALKNCNLTVNTVSEKGRSLFTTRDFYPGEVIVSQEPYVCVPTQKRCDGCFSTTNLSKCSRCQVVWYCGTPCQKSEWKLHRLECQALSRLDTNKRKSVTPSIRLMLKLYLRRKLQDEKIIPSTAMDNYKLVEALVAHMSDIKEEQLVLYAQMANLVHLILQWPEINIKEIAEIFSKFACNAHTICDSELRPLGTGLYPVVSIINHSCLPNSVLVFDGRVASVRAMQHVPKGTEVLISYIETAGSTVTRQKALKEQYLFTCVCPLCSKVGQYEDVQENAILEGYRCKNETCDGFLLRTTDGKAFQCQECGLVRDKEEIKQIATEIKFLSEEASKPSSSGNYHEAISIYKMIEKLQTKLYHPFSINLMQTRETILKSLMKLECWREALAYCKLTIPIYQRVYPAVHPLLGLQYYTCGKLEWYLGDTEEAVKSLTKAVDILRITHGTKTPFVKELLMMLEEARAEASYKLSSKEE 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05647 477 Gene3D SET domain 24 270 IPR046341 -
Mepo3g05647 477 Gene3D Tetratricopeptide repeat domain 397 475 IPR011990 GO:0005515
Mepo3g05647 477 Coils Coil 1 21 - -
Mepo3g05647 477 Coils Coil 315 335 - -
Mepo3g05647 477 SMART set_7 11 250 IPR001214 GO:0005515
Mepo3g05647 477 Gene3D - 102 186 - -
Mepo3g05647 477 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 15 463 - -
Mepo3g05647 477 SUPERFAMILY TPR-like 340 442 IPR011990 GO:0005515
Mepo3g05647 477 ProSiteProfiles Zinc finger MYND-type profile. 52 89 IPR002893 -
Mepo3g05647 477 Gene3D - 51 101 - -
Mepo3g05647 477 Pfam MYND finger 52 89 IPR002893 -
Mepo3g05647 477 Pfam SET domain 22 243 IPR001214 GO:0005515
Mepo3g05647 477 ProSiteProfiles SET domain profile. 11 244 IPR001214 GO:0005515
Mepo3g05647 477 ProSitePatterns Zinc finger MYND-type signature. 52 89 IPR002893 -
Mepo3g05647 477 SUPERFAMILY SET domain 10 243 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo3g05647 SET 8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05647 K11426 - gmx:100789518 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05647 3 70446731 70452418 Mepo3g05647 3 70446731 70452418 ECH