Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05634 ATGGACATGATGGACATGGATGCCATCAATGACCTCCACTTCTCTGAACACAGCTCCCTTACCAACACCCCTACTTCCGACGATGATTATGGTTGCACCTGGAACCACTGGTCTCCCATCGTCAACTGGGACACCTTTACAGGTGCCCCAGATGACTTTCACCATCTCATGGACACGATCATCGAGGACAGAACCACTGTCTTCGACCAGCTCAGTCCATCCATCACCACAACCACCACAACCACAACCACGGATGAGGAAGAAGAAGAAATGGAAACAACAACCACAACAACAACAACAACAACAGAAAAAACACAAGAAGTTGGTGATGATTCAAAAGGGCTAAAATTAGTGCACTTATTGATGGCTGGCGCGGAAGCCTTAACCGGTTCAACCAAAAACCGTGACTTAGCTCGAGTGATATTGATCCGGCTCAAGGAATTAGTCTCACAACACGCTAATGGCTCCAACATGGAGAGACTCGCCGCTCATTTCACCGAAGCCCTTCATGGACTACTAGAAGGTGCTGGGGGTGCGCATAATAACCACCATCACCACCACAACAACAAACATTACCTCACCACAAATGGTCCCCACGACAACCAAAACGACACACTTGCTGCTTTCCAACTACTTCAAGACATGTCACCTTACGTCAAATTCGGCCACTTCACAGCCAATCAGGCCATCATTGAGGCCGTGGCCCACGAACGCCGCGTCCATGTCATCGACTACGACATCATGGAAGGGGTTCAATGGGCCTCATTAATCCAATCACTAGCCTCCAACAACAACGGTCCACATCTCCGAATAACAGCATTATCCCGTACCGGAACGGGAAGGAGGTCAATCGCCACCGTACAAGAAACTGGCAGGCGATTAACCTCCTTCGCCGCTTCCCTTGGACAACCGTTTTCTTTCCACCACTGCAGATTAGACTCCGATGAAACTTTCCGTCCTTCTGCATTAAAGCTTGTACGTGGAGAGGCTTTGGTTTTCAACTGCATGCTGAATTTACCTCACCTTAGCTACCGTGCACCGGAATCAGTTGCTTCGTTTTTGAACGGAGCAAAAACGTTGAATCCAAAGCTTGTGACGTTGGTTGAAGAAGAAGTTGGTTCTGTTGTTGGTGGGTTTGTGGAAAGGTTCATGGACTCACTTCATCATTATTCAGCGGTTTTTGATTCATTGGAGGCTGGTTTTCCGATGCAGAACCGGGCCCGGGCTTTGGTGGAGAGGGTATTTTTTGGGCCTAGGATTGCAGGTTCGTTGGGCCGGATATATAGAACGGGTGGTGAAGAGGAAAGAAGGTCGTGGGGGGAGTGGTTAGGTGAGGTAGGGTTTAGGGGAGTTCCGGTGAGCTTTGCAAATCATTGTCAAGCAAAGCTGTTGTTAGGGCTTTTTAATGACGGGTATAGGGTTGAAGAGGTGGGTGTGGGTAGTAATAAGTTGGTGTTGGATTGGAAATCAAGGCGTTTGCTTTCTGCTTCACTTTGGACTTGTTCTTCTTCAGATTCTGATTTATAG 1527 0.4826 MDMMDMDAINDLHFSEHSSLTNTPTSDDDYGCTWNHWSPIVNWDTFTGAPDDFHHLMDTIIEDRTTVFDQLSPSITTTTTTTTTDEEEEEMETTTTTTTTTTEKTQEVGDDSKGLKLVHLLMAGAEALTGSTKNRDLARVILIRLKELVSQHANGSNMERLAAHFTEALHGLLEGAGGAHNNHHHHHNNKHYLTTNGPHDNQNDTLAAFQLLQDMSPYVKFGHFTANQAIIEAVAHERRVHVIDYDIMEGVQWASLIQSLASNNNGPHLRITALSRTGTGRRSIATVQETGRRLTSFAASLGQPFSFHHCRLDSDETFRPSALKLVRGEALVFNCMLNLPHLSYRAPESVASFLNGAKTLNPKLVTLVEEEVGSVVGGFVERFMDSLHHYSAVFDSLEAGFPMQNRARALVERVFFGPRIAGSLGRIYRTGGEEERRSWGEWLGEVGFRGVPVSFANHCQAKLLLGLFNDGYRVEEVGVGSNKLVLDWKSRRLLSASLWTCSSSDSDL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05634 508 ProSiteProfiles GRAS family profile. 108 500 IPR005202 -
Mepo3g05634 508 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 92 495 IPR005202 -
Mepo3g05634 508 MobiDBLite consensus disorder prediction 75 110 - -
Mepo3g05634 508 Pfam GRAS domain family 117 500 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05634 Mepo-Chr3 70314796 70316322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05634 80 503 GRAS Transcription Factor Family AT3G54220 35.160 3.08e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo3g05634 GRAS 7.4e-99 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05634 - - tpra:123896871 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05634 3 70314796 70316322 Mepo3g05634 3 70314796 70316322 ECH