Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05625 ATGGTTAAGTCAGAGACTAACAAGATCAAAAAAGAACCATCAAATTCAATCTCAGATAGTAGCAAGAAGAAGTACAAAGGAGTAAGAATGAGGAGTTGGGGTTCATGGGTATCAGAGATTAGAGCACCAAATCAAAAAACAAGAATTTGGTTAGGTTCTTATTCAACTGCAGAAGCAGCAGCTAGAGCTTATGATGCTGCACTTTTATGCCTTAAAGGTTCATCATCTGCATCAAATCTCAATTTCCCTTTAACAGCATCTTCACATTACAATATTCCTCAAGATATGTCTCCGAAATCAATTCAAAGAGTTGCTGCAGCTGCCGCGAATAGTTTCATTGACAACAATAATGTTAATGTTAATGTTAACACTCCCTCTTCATCGTCATTGGTTTCGTCTCCATCATCAATGGTTTCTTCTGAAGATGTTTCTTCACTTATGTCATCTTTCGATCAAGTTAATGATGAATCGATGGCTATGATATCGGAAACTAATTGGTATGGCTTAGAAGGTTTACAATCACCTAAATATGTTGATCAGATGTTGTTAAGTGCTTCTTTCTTTGATATTGATTCATCATCACATTTGTTTTGTGATGATCTATATGAAGAAAGTGACATTCCTTTGTGGAACTTCAGCTGA 642 0.3583 MVKSETNKIKKEPSNSISDSSKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSSASNLNFPLTASSHYNIPQDMSPKSIQRVAAAAANSFIDNNNVNVNVNTPSSSSLVSSPSSMVSSEDVSSLMSSFDQVNDESMAMISETNWYGLEGLQSPKYVDQMLLSASFFDIDSSSHLFCDDLYEESDIPLWNFS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05625 213 Gene3D AP2/ERF domain 23 85 IPR036955 GO:0003700|GO:0006355
Mepo3g05625 213 CDD AP2 23 83 IPR001471 GO:0003700|GO:0006355
Mepo3g05625 213 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Mepo3g05625 213 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Mepo3g05625 213 FunFam ethylene-responsive transcription factor ERF014-like 23 85 - -
Mepo3g05625 213 SUPERFAMILY DNA-binding domain 24 83 IPR016177 GO:0003677
Mepo3g05625 213 MobiDBLite consensus disorder prediction 1 23 - -
Mepo3g05625 213 SMART rav1_2 24 89 IPR001471 GO:0003700|GO:0006355
Mepo3g05625 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 156 - -
Mepo3g05625 213 ProSiteProfiles AP2/ERF domain profile. 24 83 IPR001471 GO:0003700|GO:0006355
Mepo3g05625 213 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05625 Mepo-Chr3 70241394 70242533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05625 25 212 AP2-EREBP Transcription Factor Family AT1G21910 51.485 2.84e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo3g05625 AP2 4.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05625 - - cam:101495993 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05625 3 70241394 70242533 Mepo3g05625 3 70241394 70242533 ECH