Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05605 ATGGATCCAGAGGGGAAATTATTGATGAATAGATATGAGTTTAGAAAATCATTAGGCCAAGGAAACTTTGCAAAAGTTTACAAAGCAAGGGACTTGAGAACTGGTGACAGGGTTGCTGTAAAGGTTATTGACAAGGAGAAAGTTCTAAGAGCTGGAATGATGGTTCAAACAAAGCGGGAGATCGCAACAATGAGAAGGGTTAAACACCCGAATGTTTTGCGGCTTTACGAGGTTTTGGCCACCAAAACTAAGATATACCTTATCTTAGAATATGCAAAAGGCGGTGAGCTTTTCCTCAAAATACTAGAAAAAGGTAAAATCAATTATAATCAAACAAGACAATACTTTCAACAATTGGTAAGTGCTCTAGATTTTTGCCACAAGAAGGGTGTCTACCATCGGGATTTGAAGCCTGAAAACTTGCTTTTAGACGAGAATGGTGTTCTTAAAATAGCTGATTTCGGGTTTAGCACGTTCATAGAATCTCATCGCTGCAACATGTTGCAAACAATGTGTGGAACTCCGATGTATGTAGCTCCAGATGTTCTCCGTGGAAAAGGTTATTATGGAGAAAAAGCTGATGTTTGGTCTTGCGGAGTAATCTTATTTGTTCTTTTGGCCCGTTACTATCCATTTTATGATCGGAATTCAATGGAAATGTATCGGAAAATCCACAAGGGAGAATACAAATGTCCCGACTGGTTTTCAGTCGAGATTCGCAGATTACTATCACAGATTCTCAATCCCAACCCTGATAGTAGAATATCTACTGCTAAAATAATGGAAAGTCGTTGGTTCAGAAAAGGATTACATTCGGAAAGTGTTCAAGTAGAAAGAGAGATTACAAATGTGGCTGCAAATGTTGAGTCTGATAAAGCTATTGTTGAAAATGAAATTACTATTGTTGAGCCAAATCAAGAATTGGTTCAACCAAAATATCTTAATGCTTTTCACATACTTTCTCTATCTGCAGGGCTCGATTTGTCTGTCTTTTTTGAAAGTAATAATGATGATGAAATTGAAGACATCAAGTTTACCTCCAAGAGCTCGGCCTCCTCTATCATATCAACAATGGAGGATATTGTGCACATGTTGAATATGAAGATAGTAAAGAATAATGGAGAGATGCTAAAGCTGGAGAGACAGCAAGATAGTCGACAAAGGTCACTTACCATTTCTACTGAAATATTTGAGTTTGCTCCATCTTTCTATTTGGTTGAGATAAAGAAGTACCATGGAGATGCATCGGAATACCAGAAGATATTGAAAGAACATATAATACCAGCTCTCAAAGATATCGTCTGGATTTGGCAAAGTGAGAAAAAAACACAACATTAG 1338 0.3737 MDPEGKLLMNRYEFRKSLGQGNFAKVYKARDLRTGDRVAVKVIDKEKVLRAGMMVQTKREIATMRRVKHPNVLRLYEVLATKTKIYLILEYAKGGELFLKILEKGKINYNQTRQYFQQLVSALDFCHKKGVYHRDLKPENLLLDENGVLKIADFGFSTFIESHRCNMLQTMCGTPMYVAPDVLRGKGYYGEKADVWSCGVILFVLLARYYPFYDRNSMEMYRKIHKGEYKCPDWFSVEIRRLLSQILNPNPDSRISTAKIMESRWFRKGLHSESVQVEREITNVAANVESDKAIVENEITIVEPNQELVQPKYLNAFHILSLSAGLDLSVFFESNNDDEIEDIKFTSKSSASSIISTMEDIVHMLNMKIVKNNGEMLKLERQQDSRQRSLTISTEIFEFAPSFYLVEIKKYHGDASEYQKILKEHIIPALKDIVWIWQSEKKTQH 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05605 445 CDD CIPK_C 315 431 - -
Mepo3g05605 445 SUPERFAMILY Protein kinase-like (PK-like) 8 291 IPR011009 -
Mepo3g05605 445 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Mepo3g05605 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 424 - -
Mepo3g05605 445 Gene3D Transferase(Phosphotransferase) domain 1 92 297 - -
Mepo3g05605 445 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Mepo3g05605 445 Gene3D Kinase associated domain 1, KA1 309 436 - -
Mepo3g05605 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Mepo3g05605 445 Gene3D Phosphorylase Kinase; domain 1 3 91 - -
Mepo3g05605 445 FunFam Non-specific serine/threonine protein kinase 309 435 - -
Mepo3g05605 445 FunFam CAMK family protein kinase 7 316 - -
Mepo3g05605 445 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Mepo3g05605 445 Pfam NAF domain 311 371 IPR004041 GO:0007165
Mepo3g05605 445 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05605 445 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05605 445 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05605 Mepo-Chr3 70025243 70027351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05605 1 441 CBL-interacting serine-threonine protein kinases AT5G58380 48.904 9.58e-159 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mepo3g05605 Pkinase 4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05605 K07198 - gmx:100816254 548.895