Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05596 ATGTCACCAACACCGTCTGCCGGAGTCAACGTCCCTCTCTTGACCGGATCAAATCCGGCGGCGGTTCCTGGTTCAATCCCCGGCGCCGTATTTAATGTCGCCACCAGCATAATCGGCTCTGGAATCATGTCAATTCCGGCGATTCTCAAAGTTCTCGGCGTGCTTCCTTCTTTCGCCTTGATTCTTATCGTCGCCGTGCTCGCCGAAGTTTCTGTTGATTTTCTCATGCGTTTTACACATGCCGGTGTAACCACGACGTACTCTGGTGTTATGAAGGAAGCTTTTGGGTCCGTTGGAGCTTTAAGCGCTCAAGTTTGTGTTATAATCACCAACTTTGGGGGTTTAGTTCTCTTCCTAATTATCATTGGGGATGTTTTATCTGGAAAGGAAAGTGGAGGTGAAGTGCACTTGGGACTTTTGCAACAGTGGTTTGGGGTTCATTGGTGGAATTCAAGGGAAGTTGCTCTTTTCATCACCTTGGTTCTTGTTATGCTTCCTTTGGTCTTGTACAAACGTGTAGAATCCTTGAAGTACAGTTCAGGAATATCAACTCTTCTTGCTGTGGCATTTGTTGCCATCTGTTCTGGTTTGGCTATTGTTGCTTTGGTGCAAGGAAAAACACAAACCCCTAAACTGGTTCCTCGATTAGATTACCAAACATCATTCTTTGATTTATTCACCGCAGTTCCTGTTGTAGTCACAGCATTCACATTTCATTTCAATGTGCATCCAATTGGGTTTGAGCTTGCAAAGCCATCTGATATGAAAACAGCAGTTCGATTAGCAATAATGTTCTGTGCTGTTGTCTACTTTACAATCGGTCTATTTGGCTACCTTTTGTTTGGAGATTCAACACAATCAGACATTCTAATCAATTTTGATCAGAATGCTGATTCTGCCGTTGGTTCCTTGTTCAATAGTTTAATACGTGTAAGCTACGCACTCCACATTATGTTGGTATTCCCTCTTATAAATTTCTCTTTGAGAGCCAACATTGATGAACTCCTATTCCCTAAGAAGCCTCTGCTTGCCACAGACAACAAGAGATTTGTGATTATCACTCTTGTGCTCTTAGTATTCTCCTATCTTGCTGCTATAGCAATCCCAGATATTTGGTACTTTTTTCAGTTTCTAGGATCAACAACTGCACTGTGCCTTGCCTTTGTTTTCCCTGGCACTATTGTTTTAAGGGATGCTCTTGGCATATCAACAAGACAGGACAAAATTATAGCACTGGTTATGATTATACTAGCTGTAGTGACAAGTGTAATTGCAATTTCCACCAACATTTACAATGCATTAAGTAGCAAGTCATAA 1317 0.4207 MSPTPSAGVNVPLLTGSNPAAVPGSIPGAVFNVATSIIGSGIMSIPAILKVLGVLPSFALILIVAVLAEVSVDFLMRFTHAGVTTTYSGVMKEAFGSVGALSAQVCVIITNFGGLVLFLIIIGDVLSGKESGGEVHLGLLQQWFGVHWWNSREVALFITLVLVMLPLVLYKRVESLKYSSGISTLLAVAFVAICSGLAIVALVQGKTQTPKLVPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKPSDMKTAVRLAIMFCAVVYFTIGLFGYLLFGDSTQSDILINFDQNADSAVGSLFNSLIRVSYALHIMLVFPLINFSLRANIDELLFPKKPLLATDNKRFVIITLVLLVFSYLAAIAIPDIWYFFQFLGSTTALCLAFVFPGTIVLRDALGISTRQDKIIALVMIILAVVTSVIAISTNIYNALSSKS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05596 438 PANTHER AMINO ACID TRANSPORTER 21 421 - -
Mepo3g05596 438 Pfam Transmembrane amino acid transporter protein 24 425 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05596 Mepo-Chr3 69970545 69973038 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05596 25 432 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.069 6.00e-175 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05596 - - gmx:100815694 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05596 3 69970545 69973038 Mepo3g05596 3 69970545 69973038 ECH
Mepo3g05596 3 69970545 69973038 Mepo7g02342 7 34296973 34300863 PCT
Mepo7g02343 7 34304619 34307238 Mepo3g05596 3 69970545 69973038 PCT