Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05566 ATGACTCCGAATTTGGAATGTCGCATGTACGAAGCACGGTACCCGGAGGTAGACACGGCGGTGATGATACAGGTCAAGAACATCGCCGATATGGGTGCTTACGTATCCCTTCTCGAATACAACAACATCGAAGGCATGATTTTGTTCTCCGAGCTTTCTCGCCGTCGAATTCGTAGTGTTAGCAGTCTCATCAAGGTTGGTCGAACCGAACCTGTGATGGTTCTTCGTGTTGATAAGGAAAAAGGTTACATTGATCTCAGTAAACGTAGGGTTTCTGAGGAAGATATTCAAACTTGTGAAGAACGGTATAATAAGAGTAAGCTTGTGCACTCTATTATGCGCCATGTTGCTGAAACCTTGGACCTCGATTTAGAGGATCTTTATGTTCACATTGGATGGCCTTTGTATCGCAAATATGGTCATGCTTTTGAGGCGTTCAAAATAGCTGTGACCGATCCTGATACGGTTTTGAGCCCTCTAATGCGTGAAATCAAGGAAGTTGGTCCTGATGGGAAAGAGGTGACCAAGGTGGTACCTGCTGTGTCTGAAGAAGTGAAGAATTCTCTACTTATGAACATTAGAAGACGAATGACCCCTCAGCCATTCAAAATCAGGGCAGACATTGAAATGAAATGTTTTCAATTTGATGGAATTCTACACATTAAGGAGGCAATGCGGAAGGCTGAAGCTGCTGGTAATGATGAGTGTCCTGTGGAAATTAAACTTGTTGCTCCCCCACTTTATGTGCTTACCACTCAGACACTTGACAAGGTTAGCAGTTGTTGTTGTTGTCCTGTTGACTACCAAATGAAACTAGGCATGGGTGAACCTAGCCAAAGTTCGGCAAAATCGAATCAAACCGGTTCCGGTTCATCTCGAACTGAAGCCAATCGTTCTTTGGTTTGGTACAATTGGCTCGAAAAAGAGCAAGGAATATTGGTTCTCAAGAATGCCATTGCTTGTTGCGCTGAATCTATAGAAGAACACAAGGGTAAACTTACGCTGGTGAAGCCAATTAGAGCGGATGACGATACAGATGGCCCCATTCCGATTTCTCCAATTCAGGATGAAGATAATGATGTCAGTAGTAAAGATGACAGCGAAGATGAAGAAGATACTGGAATGGGCGAGGTTGATGTGGAGAATGGTAATGCGATAATGGAGTGA 1167 0.4379 MTPNLECRMYEARYPEVDTAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRTEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETLDLDLEDLYVHIGWPLYRKYGHAFEAFKIAVTDPDTVLSPLMREIKEVGPDGKEVTKVVPAVSEEVKNSLLMNIRRRMTPQPFKIRADIEMKCFQFDGILHIKEAMRKAEAAGNDECPVEIKLVAPPLYVLTTQTLDKVSSCCCCPVDYQMKLGMGEPSQSSAKSNQTGSGSSRTEANRSLVWYNWLEKEQGILVLKNAIACCAESIEEHKGKLTLVKPIRADDDTDGPIPISPIQDEDNDVSSKDDSEDEEDTGMGEVDVENGNAIME 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05566 388 Pfam S1 RNA binding domain 15 89 IPR003029 GO:0003676
Mepo3g05566 388 Gene3D EIF_2_alpha 202 261 IPR024055 -
Mepo3g05566 388 SUPERFAMILY Nucleic acid-binding proteins 13 94 IPR012340 -
Mepo3g05566 388 CDD S1_IF2_alpha 15 90 IPR044126 GO:0003723
Mepo3g05566 388 SMART S1_6 16 89 IPR022967 -
Mepo3g05566 388 MobiDBLite consensus disorder prediction 340 388 - -
Mepo3g05566 388 SUPERFAMILY eIF-2-alpha, C-terminal domain 200 257 IPR024055 -
Mepo3g05566 388 Gene3D Translation initiation factor 2; subunit 1; domain 2 92 196 IPR024054 -
Mepo3g05566 388 Gene3D - 3 91 IPR012340 -
Mepo3g05566 388 Pfam Eukaryotic translation initiation factor 2 alpha subunit 127 257 IPR011488 GO:0003723|GO:0003743
Mepo3g05566 388 ProSiteProfiles S1 domain profile. 18 89 IPR003029 GO:0003676
Mepo3g05566 388 MobiDBLite consensus disorder prediction 361 377 - -
Mepo3g05566 388 FunFam Eukaryotic translation initiation factor 2 subunit alpha 4 91 - -
Mepo3g05566 388 SUPERFAMILY eIF2alpha middle domain-like 91 196 IPR024054 -
Mepo3g05566 388 FunFam Eukaryotic translation initiation factor 2 subunit alpha 92 196 - -
Mepo3g05566 388 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 1 378 IPR011488 GO:0003723|GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05566 Mepo-Chr3 69676312 69680077 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05566 2 388 Eukaryotic Initiation Factors Gene Family AT5G05470 62.148 1.86e-155 440