Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05561 ATGAGAAAGTGGAAATTCAGTCTTTTTCTATTCCTTGCATCGTTTTGGTTTTTGTTACAGTGTTTTGGTTTGTGTTGTTCTTTGAATGATGAAGGTAAAGCACTTTTGAAGTTCAAGGAGGGAATTTTCAGTGACCCTTTTGATGCTTTGTCAAATTGGGTTGATGATGAAGTTGGAGTTGATCCTTGTAATTGGTTTGGAGTTGAGTGTTTAGATGGAAGAGTGGTGGTGTTGAATTTGAAAAATCTCTGTCTTGAAGGAAATCTAGCACATGAGCTCGGAAGCCTTGTTCACATAAAGTCCATTGTTCTGCGGAATAATTCTTTTCATGGGATCATTCCTGAAGGAATTGTACGATTGAAGGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACCTTTACCTAAAGATATTGGGAGTAATATCTCACTAGCAATCCTTTTGCTGGACAATAATGATCTTCTTTGTGGGTTCTCTCATGGAATTAATGAATTGGTGATGATTTCTGAATCTCAAGTAGATGAAAAGCAGCTAATTAGTGCAGGAAAATTGCCAGGTTGTACAGGAAGATCTACTAAATGGCATAATCGTCGAAGTAAAAAAGGTCTTCGGAGGCTACTGCAATCCCGTGTTCCTCGTGAAGATCCTCGTAATCGTGCAGCTATTAATCCTGATACTCCTTCTCCATCTCCGTCTCCGTCTCCGTCTCCTTCTCCTTCACCTTTCCCTTCTCCGTCTCCTTCACCTTCCCCGTCTGCCTCAGAAACACCACGAATAGTGAAGAAGCCAGCTTCCCCTGATCAAAATGTTTCTGATTCTCCTTCTCCCTTGCCTGCACCGGGCTCTGTACCACAACTCAAAAGTAACTCAAACAATCATCATGTTGCTATTGTGGGTGGAATTGTGGGTGGTGCTGCATTTATTCTCATACTAAGCATTGTCGTATATCTCTTTAAAACCAACAAGGTAGCCACCGTTAAACCATGGGCTACAGGATTAAGTGGACAGCTTCAGAAGGCATTTGTGACAGGTGTGCCGAAGCTAAAGAGATCAGAGCTTGAAGCAGCCTGTGAAGATTTTAGTAATGTAATTGGCACTTCACCCATTGGTAATATATACAAAGGGACTCTATCTAGCGGTGTTGAAATAGCTGTGGCCTCTGTTACAGTGACATCATTGAAAGATTGGTCAAAGACTTCAGAAGTCCAATTCCGTAAGAAGATAGATACATTATCAAAGATGAACCACAAGAATTTTGTAAATCTTCTTGGATTTTGTGAAGAAGACGAGCCTTTCACCAGAATGGTGGTTTTTGAATATGCCCCAAATGGAACACTCTTTGAACATTTACACGTAAAAGAAGCTGAGCATTTAGATTGGGCAACAAGACTTAGAGTTGCAATTGGCACAGCTTACTGCCTGCAACATATGCACCAGTTGGACCCTCCTTTTGCACATAGTGACCTAAATACTTCATCTGTCCAACTCACTGATGACTACGCTGCCAAAATCTCGGACTTGAGTTTCTTGAACGAAATAGCTTCAGCCGATATAAAAGCTGCTGCTAAGAAACACACTGACGCAACATTAGCAAGTAACATTTACAGCTTCGGCATTATATTACTCGAAATTGTAACAGGCCGTGTTCCTTATTCGATGGATAAAGATGGCTCACTTGAAGAGTGGGCTTCACGCTATTTACAAGGGGACCAGCCTCTCAAAGAAATAATGGATCCAACACTAGCATCTTTCCAAGAAGAACAGCTGGTACAAATCGATGCGTTGATTAGGTCTTGTGCCAATGCTGATCAAGAGCAAAGACAAACAATGAAACAAATTTGTGAGAGATTAAGAGAAATAACAAAAATAAGTCCTGAAGTAGCTGTTCCTAAACTTTCACCACTTTGGTGGGCAGAACTTGAGATTGCTTCCTTTGACGCCAGCTAA 1956 0.411 MRKWKFSLFLFLASFWFLLQCFGLCCSLNDEGKALLKFKEGIFSDPFDALSNWVDDEVGVDPCNWFGVECLDGRVVVLNLKNLCLEGNLAHELGSLVHIKSIVLRNNSFHGIIPEGIVRLKELEVLDLGYNNFSGPLPKDIGSNISLAILLLDNNDLLCGFSHGINELVMISESQVDEKQLISAGKLPGCTGRSTKWHNRRSKKGLRRLLQSRVPREDPRNRAAINPDTPSPSPSPSPSPSPSPFPSPSPSPSPSASETPRIVKKPASPDQNVSDSPSPLPAPGSVPQLKSNSNNHHVAIVGGIVGGAAFILILSIVVYLFKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSPIGNIYKGTLSSGVEIAVASVTVTSLKDWSKTSEVQFRKKIDTLSKMNHKNFVNLLGFCEEDEPFTRMVVFEYAPNGTLFEHLHVKEAEHLDWATRLRVAIGTAYCLQHMHQLDPPFAHSDLNTSSVQLTDDYAAKISDLSFLNEIASADIKAAAKKHTDATLASNIYSFGIILLEIVTGRVPYSMDKDGSLEEWASRYLQGDQPLKEIMDPTLASFQEEQLVQIDALIRSCANADQEQRQTMKQICERLREITKISPEVAVPKLSPLWWAELEIASFDAS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05561 651 Pfam Leucine rich repeat N-terminal domain 29 70 IPR013210 -
Mepo3g05561 651 FunFam Nuclear pore complex protein NUP107 28 188 - -
Mepo3g05561 651 Pfam Protein tyrosine and serine/threonine kinase 364 620 IPR001245 GO:0004672|GO:0006468
Mepo3g05561 651 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Mepo3g05561 651 MobiDBLite consensus disorder prediction 229 255 - -
Mepo3g05561 651 Gene3D Phosphorylase Kinase; domain 1 333 443 - -
Mepo3g05561 651 FunFam Inactive receptor-like serine/threonine-protein kinase 335 443 - -
Mepo3g05561 651 ProSiteProfiles Protein kinase domain profile. 361 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05561 651 MobiDBLite consensus disorder prediction 185 291 - -
Mepo3g05561 651 SUPERFAMILY L domain-like 26 164 - -
Mepo3g05561 651 SUPERFAMILY Protein kinase-like (PK-like) 344 620 IPR011009 -
Mepo3g05561 651 PANTHER PROTEIN MALE DISCOVERER 2 11 647 - -
Mepo3g05561 651 MobiDBLite consensus disorder prediction 269 291 - -
Mepo3g05561 651 Gene3D Ribonuclease Inhibitor 27 204 IPR032675 -
Mepo3g05561 651 Gene3D Transferase(Phosphotransferase) domain 1 444 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05561 Mepo-Chr3 69641251 69645081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05561 10 624 Receptor kinase-like Gene Family AT1G66830 25.598 2.73e-45 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mepo3g05561 PK_Tyr_Ser-Thr 3.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05561 - - psat:127084000 972.23