Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05534 ATGAAGAAACCACCTTCCACCTCTGTCACCACCCATCTCATCGCCGTCACCGCCATAATCATCTTTTATTTTTCAGCCTCTGCCCATGCTTTAGGCTCCGGCACCACCTTATCTGTCACATACTCCCCTGCCACCGTATGCGGGATCATATCAGGTGAAACAACACAGCACATTCAGTGTTACCGTGAAGGAGAAGTTTTCAACATCCTTCCCAACGTTTCATTTTCTTCAATCTCTGGTGGAAGAAGCTACTTTTGTGGTTTAAGGTCTGGTAACTACAGTTTACATTGTTGGGATAGTTCTTCTTTTCAAACGAAAAGACTTTACTCTAATGACTCTGTTTTATTAGAGAATCTCTCTGTTGGAGATTTTCAAGTTTGTGCTACTGTGGTTGGTGTTGGAACAGTGCGATGCTGGAGAACATTTGATGGATTTGAGCCATCTGGGTTGGATCAATTCGGTTCGATTTCATCTGGTTCGAATTTTTCTTGTGGGATTATGAAAACTGGTTCACAAGTTCGGTGTTGGGGTGAAAAAACCGTTGCTGAAAGGTTACAGAACGAGTTTGGAAACATGTCTATGTTGAGTATTGTAGCTGGTGGTTCAAATGTTTGTGGTTTGAATTCAACTGGTTTTTTGGTTTGTAAAGGAAGTAACAGTTCTGGTCAACTTGATGTTCCACAAGGTGGTGCTTTTGAGTTTGGTGATATAGCACTTGGTGATGAACATGGTTGTGCTGTTAGAAGATTGAATGGTTCTGTTGTTTGTTGGGGTGGAAAAGGGGAATTTTCTGTGGATTTTATTGAAGGGGTTTCTTTTGAGTTGATTGTTTCTGGTTCTAATTTTACTTGTGGATTGACAACAGCCAATTTTTCTGTTGTTTGTTGGGGACCTGGTTGGTCTAATGGATCAAATGGTTCTGAATCTGTTCTTTCTTTGTCTCGGATTCTTCCGGGGCCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGTATATATCCTGGTTCTCAATCATTATGTTCTAATTCAGGTCACATTTGCAGGCCAAATATATGTAACACTCAAATAACAAGCCCGCCGCCGCCTCCACCAGTTCAACCTCCACCAGCACCGGCACCTTCTCCTCCTCAATCTTCTCGATCGAAGACATTGACAACAGGATTATTAGTTTTTGCAATTGTTGGATCAGTGGGAGGTTTTATTGGTATATGCACAATAGTTTATTGTTTATGGACAGGTGTTTGTTTTGGTAAAAAGAAAGTTCACAGTTCTGTGCAACCAACAGTTACAAGAGGTAGCAGCAACAGTTCAAATTCTAGTGCATCTTCGATAAAATCAGTCATTATGCGTCAAGGTTCGAGAATAATGAGGCGGCAGAGGAGTGGACCTTCATCAACAAAGCATCAAGAAAGGGCAGAGGAGTTTAGTCTTTCTGAGCTTATGGCAGCTACCAATAATTTCTCTTTCCAGAACAAAATTGGTGCCGGAAGCTTTGGTATTGTGTATTTTGGAAAATTAACAGATGGTCGCGAAGTAGCAATCAAGAGAGGTGAACCAGGTACAAAGCTTAAAAAATATCAAGAGAAAGAGAGTGCATTTGAGTCCGAGTTAGCTTTTTTGTCGCGTTTACATCATAAACACTTGGTTAGACTAGTTGGTTATTGTGAGGAGAAAGATGAGAGGCTTTTGGTGTATGATTACATGAAGAACGGTTCATTGCATAGTCATTTGCATGATAAGAACAATGTAGAAAAAGGTAGCAATTTGTTGAATTCTTGGAAAATGAGGATCAAAATTGCTTTGGATGCATCAAGAGGAATAGAATATCTACATAACTATGCAGTTCCTTCAATAATTCATAGAGATATTAAGTCATCAAACATTCTTCTTGATTCAACTTGGACAGCAAGAGTATCTGATTTTGGATTATCATTGATGAGTCCAGAAGCTGATATTGATTACAAACCAACAAAAACAGCAGGAACGGTTGGTTATATCGATCCCGAGTACTATGGTTTGAATTTATTAACAGCAAAGAGTGATGTATATGGACTTGGAGTTGTATTACTTGAATTGTTAACAGGAAAAAGAGCTATATTTAGGAATGGTGAAGATGGTGGAAATCCTTTGAGTATAGTTGATTTTGCAGTGCCTGCTATTCTGGCTGGTGAACTGATGAAAATTTTGGACTCAAGAGTTGGACAACCGCCGGCAGAAAGTAATGAATCGGAGGCGGTCGAGTTAATGGCGTATACTGCTGTACATTGTGTGAATTTGGAAGGGAAAGATAGACCAACTATGGCTGATATTGTGGCTAATTTGGAGAGAGCATTGCTTATTTGTGAAGGTGGTGGTAACCATGAGATTGAAAGCATTTCCAGTGTTACTATCTCTGTTTCAGATTGA 2403 0.3983 MKKPPSTSVTTHLIAVTAIIIFYFSASAHALGSGTTLSVTYSPATVCGIISGETTQHIQCYREGEVFNILPNVSFSSISGGRSYFCGLRSGNYSLHCWDSSSFQTKRLYSNDSVLLENLSVGDFQVCATVVGVGTVRCWRTFDGFEPSGLDQFGSISSGSNFSCGIMKTGSQVRCWGEKTVAERLQNEFGNMSMLSIVAGGSNVCGLNSTGFLVCKGSNSSGQLDVPQGGAFEFGDIALGDEHGCAVRRLNGSVVCWGGKGEFSVDFIEGVSFELIVSGSNFTCGLTTANFSVVCWGPGWSNGSNGSESVLSLSRILPGPCVQSSCSECGIYPGSQSLCSNSGHICRPNICNTQITSPPPPPPVQPPPAPAPSPPQSSRSKTLTTGLLVFAIVGSVGGFIGICTIVYCLWTGVCFGKKKVHSSVQPTVTRGSSNSSNSSASSIKSVIMRQGSRIMRRQRSGPSSTKHQERAEEFSLSELMAATNNFSFQNKIGAGSFGIVYFGKLTDGREVAIKRGEPGTKLKKYQEKESAFESELAFLSRLHHKHLVRLVGYCEEKDERLLVYDYMKNGSLHSHLHDKNNVEKGSNLLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDSTWTARVSDFGLSLMSPEADIDYKPTKTAGTVGYIDPEYYGLNLLTAKSDVYGLGVVLLELLTGKRAIFRNGEDGGNPLSIVDFAVPAILAGELMKILDSRVGQPPAESNESEAVELMAYTAVHCVNLEGKDRPTMADIVANLERALLICEGGGNHEIESISSVTISVSD 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05534 800 Gene3D - 183 347 IPR009091 -
Mepo3g05534 800 SUPERFAMILY Protein kinase-like (PK-like) 463 773 IPR011009 -
Mepo3g05534 800 Coils Coil 522 542 - -
Mepo3g05534 800 FunFam serine/threonine-protein kinase-like protein CCR1 455 566 - -
Mepo3g05534 800 Gene3D Phosphorylase Kinase; domain 1 447 566 - -
Mepo3g05534 800 Pfam Protein kinase domain 487 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05534 800 SMART serkin_6 486 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05534 800 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 178 783 IPR044815 GO:0004674
Mepo3g05534 800 ProSiteProfiles Protein kinase domain profile. 486 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05534 800 SUPERFAMILY RCC1/BLIP-II 66 297 IPR009091 -
Mepo3g05534 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Mepo3g05534 800 Gene3D Transferase(Phosphotransferase) domain 1 567 781 - -
Mepo3g05534 800 MobiDBLite consensus disorder prediction 356 380 - -
Mepo3g05534 800 MobiDBLite consensus disorder prediction 356 375 - -
Mepo3g05534 800 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05534 Mepo-Chr3 69334362 69336959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05534 1 780 Receptor kinase-like Gene Family AT3G55950 57.335 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mepo3g05534 Pkinase 7.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05534 - - gmx:100786639 1099.35