Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05519 ATGGCCACCACCGCAACCGCCGCCTTCACATCACATTTTTTCGGCACTAGTCTCTGCAAACCAACCTCAAACATGGGAAGAGTTCGTGCCTTCTTCAACCTAGGTACCAAGTTAAAGCCAGCACCTAAGAAAAAGGAAGTGAAAAAAGTGAGAAAACAAGAAAGTGATGGGCTAGTGTGGTTTCCTGGTGCTCAGCCACCGGAATGGCTCGATGGGACGATGATCGGTGACCGTGGTTTTGATCCATTGGGATTAGCCAAACCTGTTGAGTATCTGCAGTTTGATCTTGATTCACTTGACCAAAATTTGGCTAAGAACCTTGCAGGTGATATTATTGGGACTAGGGTGGAGAGTACAGAGGTTAACCCTACACCGTTTCAGCCGTACACGGAGGTTTTTGGAATTCAGAGGTTTCGTGAGTGTGAGGTTATTCATGGAAGATGGGCTATGCTTGGTGCTCTTGGTGCTTTGGCTGTTGAAGCTTTCACTGGTGTCGCATGGCAAGATGCTGGAAAGGTAGAGTTGGTGGAAGGATCATCCTACTTTGGATTTTCTCTTCCATTCTCAATTAGCACATTGATATGGATTGAAGTATTAGTAATTGGTTACATTGAGTTTCAAAGGAATGCAGAGCTTGACCCAGAGAAAAGGTTATACCCAGGTGGAAAATTCTTTGATCCTCTTGGTTTGGCAAGTGATCCTGAAGAAAAAGAAAGACTTCAATTGGCAGAGATTAAGCATTCTCGTTTGGCCATGGTGGTTTTCCTCATCTTTGCAATTCAAGCTGCTGTTACAGGAAAAGGACCTATTGGTTTCATTGCTACCTTCAACCAGTGA 837 0.4444 MATTATAAFTSHFFGTSLCKPTSNMGRVRAFFNLGTKLKPAPKKKEVKKVRKQESDGLVWFPGAQPPEWLDGTMIGDRGFDPLGLAKPVEYLQFDLDSLDQNLAKNLAGDIIGTRVESTEVNPTPFQPYTEVFGIQRFRECEVIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYFGFSLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEEKERLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPIGFIATFNQ 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05519 278 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 9 274 IPR001344 GO:0009765|GO:0016020
Mepo3g05519 278 SUPERFAMILY Chlorophyll a-b binding protein 58 275 - -
Mepo3g05519 278 Gene3D Chlorophyll a/b binding protein domain 58 278 - -
Mepo3g05519 278 Pfam Chlorophyll A-B binding protein 66 262 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05519 Mepo-Chr3 69159998 69162815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05519 22 275 Chloroplast and Mitochondria Gene Families AT3G08940 71.260 3.29e-129 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05519 K08915 - fve:101300760 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05519 3 69159998 69162815 Mepo3g05519 3 69159998 69162815 ECH