Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05512 ATGAAACCCTTTTTGCACATATTACATGCACTTTTGCTTTGGTTTGGCATAAACACATTTGCTTATGCATCAAGAAATGATACAGACCATTTGGCACTGCTCAAATTCAAGGAATCAATATCCAAAGACTCAAATAGAATCTTAGACTCTTGGAATAGTTCTACACAATTTTGCAAGTGGCATGGAATCACATGCATGAATCAAAGAGTTACAGAGTTGAAACTAGAAGGATATAAGTTGCATGGATCCATATCACCTTATGTTGGTAATCTCTCTTTTTTAACAAACTTGAATCTCATGAACAACAGCTTCTATGGAACAATCCCGCAAGAATTGTGTCGTTTAGTACAATTACAAAAACTTTACCTCACAAATAACTCATTGGTTGGAGAAATTCCTACAAACTTGTCAAGTTTGTTGGATCTTAAAGACTTATTCTTGCAAGGGAACAATTTGGTTGGCAGAATACCAATTGAATTTGGCTCTCTTAGGAAGCTCCAAAAAGTAAATTTGTGGAATAACAATTTAACAGGAGAAATTCCACCATCTATAGGGAATCTTACATTTCTTATTAATCTTAATTTAGGTTCCAACAACTTGGAGGGAAATATTCCACCTGAAATATGTCATTTGAAGAATTTGGCAACTATATCAGTAGGTATAAACAAATTGTCTGGTAAACTTCCACTTTGTCTTTATAATATGTCATCTCTCACTCTACTTGCTGTTGACTTGAACCAATTTAATGGCTCTCTTCCACCAAAAATGTTTCACAGTCTTCCCAATCTCGAAACACTTTTCATCGGTGGGAATCAATTCTCAGGTCCAATCCCAACATCCATATCAAATGCATCGAACCTACGATCATTTGATATCACTCAAAACCGATTCACGGGTCAAGTTCCAAATCTTGGGAAGCTAAAAGATCTTCAGCTCATAGGTTTGTCTCAAAACAATCTTGGAAGCAACTCAACTAAAGATTTGGAGTTTATAAAGTCATTGGTGAACTGTAGTAAGTTGTATGTGGTTGATATATCCTACAATAATTTTGGAGGTTCTTTACCGAATTCCTTGGGAAATATGTCCAACCTCAACAACCTATATCTCGGGGGCAATCATATATTAGGAAATATTCCTGTGGAATTAGGAAATCTTGCGAAGCTATATCTCTTCACCGTGGAAAATAACCGTTTTGAAGGGATTATTCCAGATACTTTTAGGAAGTTTCAAAAGTTGCAAGTGTTAGAATTGAGTGGAAATCGGCTGTCTGGAAATATACCAGCCTTTATAGGAAACCTCAGTCAGTTGTTTTATTTAGGTCTAGGAGATAACATATTAGAAGGAAATATTCCTCTAAGTATAGGAAACTGCCAAAAGTTGTATCACTTAGACCTTTCACAAAACAATCTTAGAGGAACCATACCGATAGAGGTTTTTAGTCTCTTCTCACTAACAAGACTATTGGACTTGTCGGGAAACTCGTTTAGTGGTAGTCTACCACAAGAAGTAGGCAAGCTAGAAAATATCGGAAAGTTGAATTTTTCTGAGAATAATCTATCTGGTGATATTCCTAGAACCATTGGGGAATGTGTTAGCTTGGAGTACCTTTATTTGCAAGGAAATTCCTTCCATGGAGTCATGCCTACTTCTCTAGCTTCACTGAAAGGCCTTCAACATTTAGACCTGTCACGAAACCACTTGTCTGGATCAATTCCTAAAGCTCTACAAAATATGTCTTTCCTACAATACTTCAATGTATCTTTTAACATGTTGGAAGGCGAGGTACCAACGGAAGGTGTCTTTCAAAATTCAAGTGAGGTTGCGGTAACAGGCAACACTGACCTTTGTGGAGGTATTTCAAAACTGCACCTACCTCCATGCCCTTTAAAAGGAGAGAAACATTCAAAACATCGTGATTTGAAGTTGATAGCAGTGATAGTTAGTATGGTTTCTTTTCTTCTTATACTTCTACTTATTCTAACTATCTATTGCATAAGGAAAAGAAACAAGAAACCTTATTCCGATTCACCAACAATTGACCTTCTGGTTAAGATTTCATATGAAGACTTGTATAATGGAACCGATGGATTCTCAACAAGAAATTTGATTGGATTTGGAAATTTTGGCTCTGTATACCTAGGAACTCTCGAGTTAGAGGATACACTCGTAGCCATAAAGGTTTTGAAACTTCATAAGAAGGGAGCTCGTAAGAGTTTCCTTGCTGAATGCAATGCACTAAAAAATATTAGACACCGAAATTTGGTTAAGATTTTAACAAGTTGTTCCAGTACAGATTTCAAAGGTCATGAATTTAAAGCTCTTGTTTTTGAGTACATGAAGAATGGAAGCTTAGAAAGTTGGTTGCATCCAGCAAAAGAACTTGCAGGCCCACGAAAAACATTGAATCTAGCACAAAGGTTAAATATTATTATTGACGTTGCTTCGGCATTTCATTATCTTCACCATGAGTGCGAGCAACCTGTCATTCATTGTGATTTAAAGCCTAGCAATGTTCTTCTTGATGATTGTATGGTAGCTCATGTGAGTGATTTTGGCATAGCAAAGTTGCTCCCAAGTATTGGAGTCTCATTGATGCAAAATAGTACTGTTGGAATACAAGGGACAATTGGTTATGCTCCTCCAGAGTATGGAATGGGTTCTAAGCTTTCAATTGAAGGCGACATGTATAGCTTCGGAATTCTAATTTTAGAAATGCTAACCGGAAGGAGACCTACAGATGAAATGTTTGAAGATAGTCATAGTCTCCACAATTTTGTTAAAGTTTCAATTTCGAACGACCTTATGCAGGTTGTGGATCCAGCCATTATCCACGACGAATTGGAAGGGGCTACTTGCAGCGGTGTTATGCATTCTAATGTAGAGAAATTTTTAATTTCACTTTTTAGCATTGCACTTGGTTGTTCAATGGAATCACCAAAAGAAAGGATGAGTATGGTTGAAGTCATTAGAGAGCTTAATATAATTAAAAGTTTCTTTCCTACTGGGGATCAAGCTGAATTACAGCCACAAAAAATTTTTAAGGCTGTTATTGGAAACAAGATTTTGCGCATCTTGAAGGCGCATGGGATTGCACATGAAATTCCTGAAGATCTGTATCAGCTGATCAAGAAGGCAGTCTCAATTAGGAAGCATTTGGAGAGGAATGGGAAGGACAAGGATTCCAAATTCAGGCTAATTTTGGTCGAGAGCAGGATCCGTCGCCTTGCTCATTACTATAAGAAGACAGAAGCTTCCATCAGTATAGAAATACGAATCAACAACTGCCAGCACTCTTGTTGCTTGAAGAGATGGTCAGCGATATCATAG 3327 0.3712 MKPFLHILHALLLWFGINTFAYASRNDTDHLALLKFKESISKDSNRILDSWNSSTQFCKWHGITCMNQRVTELKLEGYKLHGSISPYVGNLSFLTNLNLMNNSFYGTIPQELCRLVQLQKLYLTNNSLVGEIPTNLSSLLDLKDLFLQGNNLVGRIPIEFGSLRKLQKVNLWNNNLTGEIPPSIGNLTFLINLNLGSNNLEGNIPPEICHLKNLATISVGINKLSGKLPLCLYNMSSLTLLAVDLNQFNGSLPPKMFHSLPNLETLFIGGNQFSGPIPTSISNASNLRSFDITQNRFTGQVPNLGKLKDLQLIGLSQNNLGSNSTKDLEFIKSLVNCSKLYVVDISYNNFGGSLPNSLGNMSNLNNLYLGGNHILGNIPVELGNLAKLYLFTVENNRFEGIIPDTFRKFQKLQVLELSGNRLSGNIPAFIGNLSQLFYLGLGDNILEGNIPLSIGNCQKLYHLDLSQNNLRGTIPIEVFSLFSLTRLLDLSGNSFSGSLPQEVGKLENIGKLNFSENNLSGDIPRTIGECVSLEYLYLQGNSFHGVMPTSLASLKGLQHLDLSRNHLSGSIPKALQNMSFLQYFNVSFNMLEGEVPTEGVFQNSSEVAVTGNTDLCGGISKLHLPPCPLKGEKHSKHRDLKLIAVIVSMVSFLLILLLILTIYCIRKRNKKPYSDSPTIDLLVKISYEDLYNGTDGFSTRNLIGFGNFGSVYLGTLELEDTLVAIKVLKLHKKGARKSFLAECNALKNIRHRNLVKILTSCSSTDFKGHEFKALVFEYMKNGSLESWLHPAKELAGPRKTLNLAQRLNIIIDVASAFHYLHHECEQPVIHCDLKPSNVLLDDCMVAHVSDFGIAKLLPSIGVSLMQNSTVGIQGTIGYAPPEYGMGSKLSIEGDMYSFGILILEMLTGRRPTDEMFEDSHSLHNFVKVSISNDLMQVVDPAIIHDELEGATCSGVMHSNVEKFLISLFSIALGCSMESPKERMSMVEVIRELNIIKSFFPTGDQAELQPQKIFKAVIGNKILRILKAHGIAHEIPEDLYQLIKKAVSIRKHLERNGKDKDSKFRLILVESRIRRLAHYYKKTEASISIEIRINNCQHSCCLKRWSAIS 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05512 1108 SUPERFAMILY L domain-like 27 320 - -
Mepo3g05512 1108 CDD Ribosomal_S15p_S13e 1020 1082 IPR000589 GO:0003735|GO:0005840|GO:0006412
Mepo3g05512 1108 Gene3D Phosphorylase Kinase; domain 1 680 778 - -
Mepo3g05512 1108 Pfam Leucine Rich Repeat 165 187 IPR001611 GO:0005515
Mepo3g05512 1108 FunFam LRR receptor-like serine/threonine-protein kinase EFR 330 633 - -
Mepo3g05512 1108 SUPERFAMILY S15/NS1 RNA-binding domain 1016 1083 IPR009068 -
Mepo3g05512 1108 SMART LRR_sd22_2 115 138 - -
Mepo3g05512 1108 SMART LRR_sd22_2 409 435 - -
Mepo3g05512 1108 SMART LRR_sd22_2 260 286 - -
Mepo3g05512 1108 SMART LRR_sd22_2 554 580 - -
Mepo3g05512 1108 SMART LRR_sd22_2 361 380 - -
Mepo3g05512 1108 SMART LRR_sd22_2 457 478 - -
Mepo3g05512 1108 SMART LRR_typ_2 235 259 IPR003591 -
Mepo3g05512 1108 SMART LRR_typ_2 187 211 IPR003591 -
Mepo3g05512 1108 SMART LRR_typ_2 530 553 IPR003591 -
Mepo3g05512 1108 SMART LRR_typ_2 554 577 IPR003591 -
Mepo3g05512 1108 SMART LRR_typ_2 115 139 IPR003591 -
Mepo3g05512 1108 SMART LRR_typ_2 163 186 IPR003591 -
Mepo3g05512 1108 SMART LRR_typ_2 578 603 IPR003591 -
Mepo3g05512 1108 SMART LRR_typ_2 361 385 IPR003591 -
Mepo3g05512 1108 SMART LRR_typ_2 481 506 IPR003591 -
Mepo3g05512 1108 SMART LRR_typ_2 260 284 IPR003591 -
Mepo3g05512 1108 SMART LRR_typ_2 409 433 IPR003591 -
Mepo3g05512 1108 Pfam Protein kinase domain 699 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05512 1108 Gene3D Ribonuclease Inhibitor 147 256 IPR032675 -
Mepo3g05512 1108 Gene3D Ribonuclease Inhibitor 257 332 IPR032675 -
Mepo3g05512 1108 SUPERFAMILY L domain-like 331 425 - -
Mepo3g05512 1108 SUPERFAMILY L domain-like 393 617 - -
Mepo3g05512 1108 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Mepo3g05512 1108 Gene3D Ribonuclease Inhibitor 333 628 IPR032675 -
Mepo3g05512 1108 ProSitePatterns Protein kinases ATP-binding region signature. 703 726 IPR017441 GO:0005524
Mepo3g05512 1108 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Mepo3g05512 1108 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 779 1004 - -
Mepo3g05512 1108 PANTHER LEUCINE RICH REPEAT KINASE 2 332 997 - -
Mepo3g05512 1108 ProSitePatterns Ribosomal protein S15 signature. 1048 1078 IPR000589 GO:0003735|GO:0005840|GO:0006412
Mepo3g05512 1108 Gene3D - 1033 1085 - -
Mepo3g05512 1108 FunFam LRR receptor-like serine/threonine-protein kinase EFR 668 778 - -
Mepo3g05512 1108 Gene3D Ribonuclease Inhibitor 28 141 IPR032675 -
Mepo3g05512 1108 Pfam Ribosomal protein S15 1033 1083 IPR000589 GO:0003735|GO:0005840|GO:0006412
Mepo3g05512 1108 FunFam 40S ribosomal protein S13 1033 1090 - -
Mepo3g05512 1108 ProSiteProfiles Protein kinase domain profile. 697 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05512 1108 Gene3D Transferase(Phosphotransferase) domain 1 779 1008 - -
Mepo3g05512 1108 SUPERFAMILY Protein kinase-like (PK-like) 670 994 IPR011009 -
Mepo3g05512 1108 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 63 329 - -
Mepo3g05512 1108 SMART Ribosomal_S15_2 1020 1089 IPR000589 GO:0003735|GO:0005840|GO:0006412
Mepo3g05512 1108 Pfam Leucine rich repeat 237 297 IPR001611 GO:0005515
Mepo3g05512 1108 Pfam Leucine rich repeat 532 591 IPR001611 GO:0005515
Mepo3g05512 1108 Pfam Leucine rich repeat 387 444 IPR001611 GO:0005515
Mepo3g05512 1108 SMART serkin_6 697 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05512 Mepo-Chr3 69071872 69077546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05512 26 999 Receptor kinase-like Gene Family AT3G47570 46.309 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo3g05512 Pkinase 3.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05512 - - aprc:113870110 1325.07