Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05511 ATGGAGGCTAAAGAACAAGATGTTTCATTGGGAGCTAACAAATTCCCAGAGAGACAACCAATTGGTATTGCAGCTCAGAGCCATGATGATGGCAAGGACTACAAGGAACCACCACCAGCTCCATTGTTTGAGCCTTCTGAGCTCACTTCATGGTCTTTCTACAGAGCTGGAATAGCTGAGTTTGTAGCTACTTTTCTGTTCTTGTACATCACTATCTTGACTGTTATGGGTGTTAACAGATCTGAGTCCAAGTGTAAAACTGTTGGTATTCAAGGAATTGCTTGGTCTTTTGGTGGCATGATCTTTGCCCTTGTTTACTGTACCGCTGGTATCTCTGGGGGTCACATAAACCCAGCAGTGACATTCGGTTTGTTCTTGGCAAGGAAATTATCATTGACCAGGGCTGTGTTCTACATGGTGATGCAAACCCTTGGTGCTATCTGTGGTGCTGGTGTGGTTAAGGGTTTCGAGGGAAAGACATTTTTCACCGCGAAACACGGTGGTGCTAACTTTGTTGCTCCTGGTTACACAAAAGGTGATGGACTTGGTGCTGAGATTGTTGGTACCTTTGTTCTTGTTTACACTGTCTTCTCCGCCACTGATGCCAAGCGTAGTGCCAGAGACTCCCACGTTCCTATTTTGGCTCCACTGCCAATTGGGTTCGCTGTATTTTTGGTGCATTTGGCCACTATCCCAATCACTGGAACTGGTATCAACCCTGCTAGGAGTCTTGGTGCTGCAATTATCTTCAACAAAGACCTTGGTTGGGATGATCACTGGATTTTCTGGGTTGGACCATTCATTGGTGCAGCACTTGCAGCTCTCTACCACACAGTTGTGATCAGAGCCATTCCTTTCAAGTCAAGTAATTAA 873 0.4559 MEAKEQDVSLGANKFPERQPIGIAAQSHDDGKDYKEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVNRSESKCKTVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQTLGAICGAGVVKGFEGKTFFTAKHGGANFVAPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDLGWDDHWIFWVGPFIGAALAALYHTVVIRAIPFKSSN 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05511 290 FunFam Probable aquaporin PIP1-2 40 290 - -
Mepo3g05511 290 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 285 IPR034294 -
Mepo3g05511 290 SUPERFAMILY Aquaporin-like 47 282 IPR023271 -
Mepo3g05511 290 CDD MIP 55 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g05511 290 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Mepo3g05511 290 Gene3D Glycerol uptake facilitator protein. 40 289 IPR023271 -
Mepo3g05511 290 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g05511 290 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g05511 290 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g05511 290 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g05511 290 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g05511 290 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g05511 290 NCBIfam MIP family channel protein 59 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g05511 290 Pfam Major intrinsic protein 47 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05511 Mepo-Chr3 69061847 69064363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05511 1 290 Major Intrinsic Protein MIP AT4G23400 83.793 4.55e-169 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05511 K09872 - gmx:100791447 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05511 3 69061847 69064363 Mepo3g05511 3 69061847 69064363 ECH
Mepo3g05511 3 69061847 69064363 Mepo7g02247 7 33180830 33182930 PCT