Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05504 ATGGCAAAGAAAAACTCCGCCACCGCCGTCAAAGACGACCCGCCACCGCAAGAAGACAAAGTCGAACAACAACAAGATGAAAACGATGAAGAAACTTCATCAGAAGCAGGTTCTTCATCTGAAGGAGGTGAAGAAGTAGAATCATCCGAAGAAGAAGCTCCAAAAACCACTCCACCTCCAAAAACCAACCCCAAGGACAATTCAGCAGAAGATGATGAAGACGAAGACGAAGACGAAGAAGAAACTGATACTGATGAAGACGAACCACCTCCAAAAACCAAACCAATTGAACAAACCCTAAAATCAAAACCCTCTATAGCACCTGCCAGATCTGGAACCAAACGTCCTGCTGAAAACAACGACACGAAACAATCAAATAAGAAGAAAACAACCGCTTCCTCCGCCGAGGAGAAGAATAAGAAGAAGGAGAAAGAGCCGGAGGAGGATGACAATAACAATAACAAGAAAACGTCGTTTCAGAGAGTTTTCACGGCGGATGATGAGGTTGCAATTCTTCAAGGGCTTGTTGATTTCACTGCCAAATCAGGGAATGATCCGACTAAGCATCTATCCGCCTTTTACCAAATTGTGAAAAAGTCTGTTCATTTTAAAGTTACGCTTGATCAATTGCGCGATAAGGTTCGGAGGTTGAGGCTCAGGTTTGAGAATAAATGTAAGAGTGGGAAGACTCCGACCTTTTCGAAGCCGATAGAGGAGACTATGTTTGAGCTTTCAAAGAAGATCTGGGGTGGTGGTAAAGTTGATGTTAATGAAGGCGAGGAGAATGGGAAAGTTAATGGGAAGGCCGCGAAGAAGGAACCGGCTGTTAAGAAAGCAGCAGCAGCGAGGACAACTAAGAAATTGGTGATGGAGCCTGATTCGCCATTGGTGGTTTCTAAGGAAATTAGGAAGGGTGAAAGTGGTAATGGAAAGGAGGATACTGGTTTGAGTTTGGTATCGAATGAAGCTATTCATTTTGAGCCAGTTATTGATGTGGTGAAGAGGGGAGTGGAGTCGATTGAGGAATCAAAGAGGGGTGAATTGGAGAGATTGACGAATAAGTACAGAATTGCTGAAATGGAGCTGTTTATGCAGAAAACTGAGTTGGCTAAGGAAACAGCTACCAAGATAAGGGATGCATTGAATTCATCATCAAGCCATTAG 1164 0.4364 MAKKNSATAVKDDPPPQEDKVEQQQDENDEETSSEAGSSSEGGEEVESSEEEAPKTTPPPKTNPKDNSAEDDEDEDEDEEETDTDEDEPPPKTKPIEQTLKSKPSIAPARSGTKRPAENNDTKQSNKKKTTASSAEEKNKKKEKEPEEDDNNNNKKTSFQRVFTADDEVAILQGLVDFTAKSGNDPTKHLSAFYQIVKKSVHFKVTLDQLRDKVRRLRLRFENKCKSGKTPTFSKPIEETMFELSKKIWGGGKVDVNEGEENGKVNGKAAKKEPAVKKAAAARTTKKLVMEPDSPLVVSKEIRKGESGNGKEDTGLSLVSNEAIHFEPVIDVVKRGVESIEESKRGELERLTNKYRIAEMELFMQKTELAKETATKIRDALNSSSSH 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05504 387 Coils Coil 125 145 - -
Mepo3g05504 387 Coils Coil 341 361 - -
Mepo3g05504 387 MobiDBLite consensus disorder prediction 1 161 - -
Mepo3g05504 387 PANTHER BNAANNG10740D PROTEIN-RELATED 60 372 IPR007592 GO:0006355
Mepo3g05504 387 MobiDBLite consensus disorder prediction 116 155 - -
Mepo3g05504 387 MobiDBLite consensus disorder prediction 69 86 - -
Mepo3g05504 387 Pfam Protein of unknown function, DUF573 159 250 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05504 Mepo-Chr3 68996026 68997485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05504 90 383 GeBP Transcription Factor Family AT4G25210 32.692 5.93e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Mepo3g05504 DUF573 4.8e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05504 - - mtr:11409742 535.413