Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05503 ATGGAATCGATGAATTCTTGTTTGAACTCATCAAACTCAAATAATAGTTATGGCTGCATATATGACAGCATCGAAGAAAGTAGTAGAATGGTAGAGAATATTCTAGGTTACAGTCTTCATAGCATGATGAATAATTTCCAAGAAGATGATTATTGGTTGATGAAGGAAACTATGTTATCTAGTGTTGATCAAATCAATCAGAACACCATCGATGAAGTGGTGCTAGAAAATAATATTGCATCAACGAGCGTTTCACTTTTTGGATATGACCAAGTTGATTCTTTGAACTTCTCTCCTCATGCAACTGATAATAATAACAATAGAACTACGAATATGGTAGAGGCCAAAAAGAAATCATTCAAGAAAGTGGTTCATTGGTCACGTGATGAACACATGCGTTTCTTGAAGGGACTTCTAGATGGCAAAGACGGAAAGTGGAAAGAAATCTCTAAGGACTATGTAAAAACAAAGACTCCATCCCAAGTAGCAAGCCATGCTCAAAAGTACGAAAAAAGGCAAAAGCAAAGACTTGATGATGATCGCAAAAATATCAAAAGGAAACTTAGGGCTAGCATCCATGATATAACTACTCTTGATCTTCTTGGAAGTGATGTCTCATATGCGTGGTTATTTGGTGACCAAGTGATTGAAGACGACAACAATAACAATGGATCACTCTCAGTCACAACTTTCAACCAAGAATGTGATCAAGATCATGAAGTTGTTGCTTCCACTTGA 738 0.3645 MESMNSCLNSSNSNNSYGCIYDSIEESSRMVENILGYSLHSMMNNFQEDDYWLMKETMLSSVDQINQNTIDEVVLENNIASTSVSLFGYDQVDSLNFSPHATDNNNNRTTNMVEAKKKSFKKVVHWSRDEHMRFLKGLLDGKDGKWKEISKDYVKTKTPSQVASHAQKYEKRQKQRLDDDRKNIKRKLRASIHDITTLDLLGSDVSYAWLFGDQVIEDDNNNNGSLSVTTFNQECDQDHEVVAST 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05503 245 SMART sant 122 172 IPR001005 -
Mepo3g05503 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 118 174 IPR017930 -
Mepo3g05503 245 Pfam Myb-like DNA-binding domain 125 169 IPR001005 -
Mepo3g05503 245 SUPERFAMILY Homeodomain-like 121 175 IPR009057 -
Mepo3g05503 245 Gene3D - 124 175 - -
Mepo3g05503 245 ProSiteProfiles SANT domain profile. 126 174 IPR017884 -
Mepo3g05503 245 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 76 225 IPR043363 -
Mepo3g05503 245 NCBIfam myb-like DNA-binding domain, SHAQKYF class 121 172 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05503 Mepo-Chr3 68990292 68991143 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo3g05503 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05503 - - mtr:11423031 388.652