Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05497 ATGGAAAATGAAAAGGTCAAATTTCCAGCTGGTTTTCGATTCTCTCCGACCGATGAAGAGCTTATAAATCAATACCTTGTCAAGAAGGTTGATGACAATAGCTTCTGTCCTATAGATATTGCTGAAGTTGATATGAATAAGTGTGAACCATGGGATTTGCCAGAGTTGGCTAAAATGGGAGAAACAAAATGGTATTTTTTCTATGTGAGGGAGAGAAAATACCCAACTGGTCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACAGGCAAAGACAAAAAGATTTTCAAGGGAAATGCATTAATTGGGATGAAAAAAACATTGGTTTTCTACATAGGAAGAGCTCCGAGTGGTGAAAAAACCAATTGGGTCATGCATGAATATCGATTGGAGGGTAACACACTCTCTGAGCACAACCTATCCACACATGGAATGAGTGAATGGGTTCTCAGTAGAATCTTTAAGAAGGATAATTGTGGAAAGAAAATGGATGGTTCAAAACATGGAAGGTTTAACTCCTCTAGAGAAGGACCATCAAATACTAATGAATCTCTATTGTCTCCATTATTGGATTCTTCTCCATACAATAGTGAAAACCAAACCACTCTCTCTGATTTCTCTCGTGTGTTCAATTCATTCTCCAATCCAAATCAAACGGAGAAACCAAAAACACAAGATGACAACATTGTTCATAACAACGAAACTAGTATCTTGAACATTTCATCCTCTTCAAAACAAATGGATGCTTATCCTTTAGCTGAAGTAATAACTGCTGATTTGAACCTAACCTCAATGGTCGGGAATTCGTCAAACTTTTTCTTCTCTCAAGAACAATCACTGTTGAGGATGCAGTTGGAGAATGAGAATATTGGATCAACCTCAAAACAAAGTCTAAACCAAGAGTTTTCTTTTGGGAGAGACTTTGATGATGCTGATATCTCATCTGTGGTATATGGAAATGGCATGTTTCAAAGGTGGTCTGGGAATCAAGAATTGTCATCAGCTTCTACTGGACATGTGGTCAATGATAGCTTGTGGAATTTCTGA 1056 0.3778 MENEKVKFPAGFRFSPTDEELINQYLVKKVDDNSFCPIDIAEVDMNKCEPWDLPELAKMGETKWYFFYVRERKYPTGQRTNRATNAGYWKATGKDKKIFKGNALIGMKKTLVFYIGRAPSGEKTNWVMHEYRLEGNTLSEHNLSTHGMSEWVLSRIFKKDNCGKKMDGSKHGRFNSSREGPSNTNESLLSPLLDSSPYNSENQTTLSDFSRVFNSFSNPNQTEKPKTQDDNIVHNNETSILNISSSSKQMDAYPLAEVITADLNLTSMVGNSSNFFFSQEQSLLRMQLENENIGSTSKQSLNQEFSFGRDFDDADISSVVYGNGMFQRWSGNQELSSASTGHVVNDSLWNF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05497 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 252 - -
Mepo3g05497 351 MobiDBLite consensus disorder prediction 175 203 - -
Mepo3g05497 351 Gene3D NAC domain 17 163 IPR036093 GO:0003677|GO:0006355
Mepo3g05497 351 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
Mepo3g05497 351 MobiDBLite consensus disorder prediction 163 203 - -
Mepo3g05497 351 Pfam No apical meristem (NAM) protein 9 133 IPR003441 GO:0003677|GO:0006355
Mepo3g05497 351 FunFam NAC domain-containing protein 100-like 17 163 - -
Mepo3g05497 351 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05497 Mepo-Chr3 68951123 68953882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05497 8 351 NAC Transcription Factor Family AT5G07680 46.197 1.15e-86 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g05497 NAM 2.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05497 - - cam:101488836 461.84