Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05475 ATGGCACCTCCTTCAGATATCAATATTCTTTCTCACCCTTGCATATATGGGGATTTTTCTTCTTCGTACTCAGAGAGGAAGTCTGGTTTTATGAAATGGTTTGGCAAGATTTTCAAAATTGGATCTAATAGAGGAAGGGGTGGTGGTCATCTTCTACAGCAACCTGTAGACGAAAACATGGCTTGGCGAGCTCCGCCTAGATCCTTGGATAACCGTGCTAGAACTAAGAAGGAGGAAGAGGATTTGAACAATGCAATTGCACTTTCTTTAAGTGAGGATTTAAAGATACCAGCAGGATATAGATGGCGAACGGGAACTGATGATGATTATGCAAAAGGACTCCAGGATCGCATACACTCATCTCTACACCCTCCATGTGCCCCTTTACCTTTTTATCCCCGCGGATACAGCATGTCATCGCATAACAGAATATGTGGAGGGTGCAACAAGGAGATACTCCACGGTAATTGTTTGGGAGTCGAACATAGTTATTTTCATCCAGACTGCTTTCGGTGTCACTCTTGTCATCATCCTATTACCGAGCGTGAGTTTTCTTTGTCAGGGAAGCATCCATATCACAAGTATTGTTTTAAGGAATTGAGTCATCCTAAATGTGAAGTTTGCCGTCATTATATACCTATAAATGGTTCTGGTTTGATTGAGTATAGGTGTCACCCCTATTGGAACCAAAAATATTGTCCATCTCATGAACATGATAATACATCTCGCTGTTGCAGCTGTGAAAGATTAGAGTCTCGGGGCGAAAGATACTTTAGATTGGATGATGGACGGATTTTGTGCTTTGAATGCATGGAATCTGCTATAACAGATACCGGTGAATGTCAGCCTCTTTATCATGCTATTAGAGACTATTACGAAGGAATGAATATGAGAATCGATCAACAAATCCCCATGCTTCTAGTTGGAAGAGAAGCACTTAATGAAGCCATCGTCGGAGAGAAGAATGGTTTCCATCACATGCCAGAAACAAGAGGGTTATGCCTTTCAGAAGAACAAACTGTCACCAGTGTACATAGATGGTCAAAAATTGGAGGTCATCGATTAATAGGGATGCGAAGTCAACCTCAAAAGTTGATTAGAAAATGTGAAGTTACAGCTATTCTTGTTCTCTATGGTCTTCCAAGATTACTCACAGGTGCTATCCTTGCACACGAGTTGATGCATGGTTGGTTACGCCTTAAAGGTTACCGCAACCTTGATCCTGCAGTAGAGGAAGGTATTTGTCAGGTTCTTTCTTACATGTGGCTTGAAGCAGAAGTTATGTCGGGTTCCAGAACCATGCCATCAACATCAGCCGCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACCTCCACCTCCTACTCATCAAAGAAAGGTGCGATATCCAAAGTTGAGAATAAATTGGGTGAATTTTTCATGAACCAGATTGCCAATGATTCTTCTCCAGCTTATGGTGGAGGCTTTAGATCGGCTAATGCAGCTGTTAATAAATACGGTTTGCGTTGTACTCTCGACCATATTCGTTTGACTGGTCAGTTCCCACTGTAA 1557 0.4181 MAPPSDINILSHPCIYGDFSSSYSERKSGFMKWFGKIFKIGSNRGRGGGHLLQQPVDENMAWRAPPRSLDNRARTKKEEEDLNNAIALSLSEDLKIPAGYRWRTGTDDDYAKGLQDRIHSSLHPPCAPLPFYPRGYSMSSHNRICGGCNKEILHGNCLGVEHSYFHPDCFRCHSCHHPITEREFSLSGKHPYHKYCFKELSHPKCEVCRHYIPINGSGLIEYRCHPYWNQKYCPSHEHDNTSRCCSCERLESRGERYFRLDDGRILCFECMESAITDTGECQPLYHAIRDYYEGMNMRIDQQIPMLLVGREALNEAIVGEKNGFHHMPETRGLCLSEEQTVTSVHRWSKIGGHRLIGMRSQPQKLIRKCEVTAILVLYGLPRLLTGAILAHELMHGWLRLKGYRNLDPAVEEGICQVLSYMWLEAEVMSGSRTMPSTSAAASSSSSSSSSSSTSTSYSSKKGAISKVENKLGEFFMNQIANDSSPAYGGGFRSANAAVNKYGLRCTLDHIRLTGQFPL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05475 518 Gene3D Cysteine Rich Protein 139 203 - -
Mepo3g05475 518 MobiDBLite consensus disorder prediction 434 458 - -
Mepo3g05475 518 SMART lim_4 144 196 IPR001781 -
Mepo3g05475 518 PANTHER PROTEIN DA1-RELATED 2 33 517 IPR045218 -
Mepo3g05475 518 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 171 236 - -
Mepo3g05475 518 Pfam Protein DA1 294 513 IPR022087 -
Mepo3g05475 518 ProSitePatterns LIM zinc-binding domain signature. 145 179 IPR001781 -
Mepo3g05475 518 CDD LIM_DA1 145 197 - -
Mepo3g05475 518 Pfam LIM domain 145 198 IPR001781 -
Mepo3g05475 518 CDD LIM 172 227 - -
Mepo3g05475 518 ProSiteProfiles LIM domain profile. 143 203 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05475 Mepo-Chr3 68578186 68582617 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo3g05475 DA1-like 1e-96 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05475 - - gmx:100798829 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05475 3 68578186 68582617 Mepo3g05475 3 68578186 68582617 ECH