Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05471 ATGATGAGACAGTGTATTTTGTGTTCTTCACTTGGTATTGTTCTTTGTGTCTTCATCTGTTTGCTTAACTTTGCACAAGCTCAAACTGCAAACGCTACTACAGATCCTTCTGAAGCAAGAGCTCTAAACTCAATCTTTAGCAAATGGGGGAAATCAGCTGACCAAAATCAATGGAACATAAGCGGCGAAATATGCAGTGGAAAAGCCATTGATAGCAGTACCTTTGATGACTACACCTTCAACCCAGCCATCAAATGTGATTGTTCCTTTAACAACGAAACTACATGCCGGATCACCCAATTGAAAGTTTATTCATTCGATGTGTTTGGTGAAATTCCACCGGAGCTATGGACTCTTATTCATCTCACCAATTTGAACCTTGACCAAAATTACTTGACGGGGTCTCTACCTCCGGCAATTGGAAATCTGACTCGTATGCAATACATGTCCATTGGCATAAATGCTTTGTCAGGAGAGCTTCCAAAGGAACTGGGAGATCTTACTCAGTTGATTTCATTGGGTTGTGGGTCCAATAACTTCTCAGGACCTTTGCCATCTGAACTTGGGAAGCTGGTAAAACTAGAACAACTCTACATAGATAGTTCAGGGATCAGTGGTCCAATTCCACACACATTTGCAAGCCTTACGAATTTGAAGATTGTATGGGCTTCTGACATAGGACTCACAGGCAGAATACCCGACTTCATAGGAAACTGGTCTAAGCTTCAATCCTTGAGGTTTCAGGGTAATTCATTTGAAGGTCCAATACCCTCATCATTATCCAAGTTGACTTCTTTGACAGAGCTGAGAATAAGTGGTCTATCTCATAGGAGTTCATCATTGGAATTTGTAAGGAATATGAAGGCTATGACTATCTTAGAATTGAGGAATAACAATATATCTGGCTCAATTCCTTCTACCGTAGGAGAATTGCAAAATTTGACCCTGCTGGACTTGAGCTTCAACAACCTTTCAGGGAAAATTCCTGGATCAATTTTCAATTTGATTTTGCTCTCTTACTTGTTTCTTGGAAATAACACACTTAGTGGCACTCTCCCTAAGCAGAAAAGTTTATATCTTAACACCATAGACTTGTCATACAATGATTTATCTGGAAGCCTCCCCTCTTGGGTAAACGAATCAAATTTACAACTGAACTTAGCAGTGAACAACTTGACAATAGATAATTCAAATAGCAAAGGTTTGCCTACTGGGCTCAACTGTCTCCAGAAAAATTTCCCATGCAATCGTGGTGTTGGAAGATATTCGGACTTTGCGATCAAGTGTGGTGGTCCCCAAATTAGAACTGCAGATGGAATTGTGTATCAAACGGACAATGAGACACTTGGTCCTGCTACATACTATGTTACTGACACAAATAGATGGGCTGTTAGTAATGTTGGAATATTTACCAGGATCAGCAATCCTCTGTTCAAAAGTAATTCTTCGAAACAGTTCACTCGTACTGTGAACTCAGAGCTTTTTCAATTTGCTCGGCTCTCTGCATCATCATTAAGATACTACGGTTTGGGATTGGAAAATGGTTTTTACAACATAACACTCCAATTTGCGGAAACAGCTATTCTGGATCCTACCACATGGCAAAGCCACGGGAGACGGGTCTTTGACATTTATATCCAGGGTACTCGTGTTTTGAAGGATTTTGACATACAAAGAGAAGCTGGAGGTGTCTCCTACAGAGCTGTTCAAAAACAATTTAGGTTTCATGTTAAAGAAAATTATGTCGAGGTCCATCTTTTTTGGGCGGGAAAAGGAACTTGTTGCATACCTGCCCCAGGTACTTATGGACCCTTGATTCAAGCCATCAGTGCTACCCCAGATTTCGTGCCTACTGTCAGTAACAAACCTCCGAGTAGTAAAAAGAATAGAGCGGGTCTAATCATAGGAATTGTTGTTGGTGTTGGAGCTGTATGCTTTCTAGCAGTTTTTGCCATTTTCTATATCAACCGGAGAAGAAAACTCTACGGTGATGATGACGACCTTTTCGGCATTGATACAATGCCAAACACTTTCAGCTACTCTGAGTTGAAAAATGCTACAAGTGACTTCAATCGTGACAATAAACTTGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGGATACTTAACGATGGAAGAGATGTAGCTGTGAAACAATTATCTATAGGATCCCACCAAGGAAAGAGTCAGTTCGTAGCTGAGATTGCTACTATATCCGCTGTGCAACACCGTAATCTTGTCAAATTATATGGATGTTGTATTGAAGGGAGTAAAAGACTACTTGTCTACGAGTATTTAGAAAATAGGAGTCTTGATCAAGCATTGTTTGGAAATGTTCTATTCCTCAATTGGTCAACCCGCTATGATATATGTATGGGTGTTGCAAGAGGTTTGACATATTTACATGAGGAGTCGCGGCTCCGGATTGTACACCGTGATGTGAAGGCTAGTAATATTCTACTCGATTCTGAGCTTGTCCCTAAAATATCTGACTTTGGATTGGCTAAATTATATGATGATAAAAAAACCCATATAAGCACCCGCGTTGCTGGGACAATTGGATATCTTGCACCGGAGTATGCCATGCGCGGACACCTTACAGAGAAAGCAGACGTTTTTTCCTTTGGTGTTGTGGCTCTGGAGTTGGTTAGTGGGAGGCCAAATTCTGATTCAACTTTGGAAGGAGAGAAGATTTATCTTCTAGAATGGGCTTGGCAGCTTCATGAAGGGAACTGTATAAATGATCTGATAGATCCTAGACTATCAGAATTCAACAAGGAAGAAGTCCAACGCCTTGTGGGAATAGCACTTTTGTGCACTCAGGCATCACCAACTTTACGGCCGTCAATGTCACGTGTAGTAGCAATGCTTTCAGGAGATATTGAAGTGGGCACTGTAACATCAAGGCCCGGATACTTGACTGACTGGAAATTTGACGATGTTAGCAGCATCATGACTGACATTTCAGCGAAGGGATTAGATACAAGTAATTACAATTCAACTGCAAGTACAAGCATAGTTGGTGGTGCATATATTCATTCACCAAGTGATCCTTCTAAAGCCATCCTTCATGACAATATTAGAGAGGGTAGGTAA 3096 0.4089 MMRQCILCSSLGIVLCVFICLLNFAQAQTANATTDPSEARALNSIFSKWGKSADQNQWNISGEICSGKAIDSSTFDDYTFNPAIKCDCSFNNETTCRITQLKVYSFDVFGEIPPELWTLIHLTNLNLDQNYLTGSLPPAIGNLTRMQYMSIGINALSGELPKELGDLTQLISLGCGSNNFSGPLPSELGKLVKLEQLYIDSSGISGPIPHTFASLTNLKIVWASDIGLTGRIPDFIGNWSKLQSLRFQGNSFEGPIPSSLSKLTSLTELRISGLSHRSSSLEFVRNMKAMTILELRNNNISGSIPSTVGELQNLTLLDLSFNNLSGKIPGSIFNLILLSYLFLGNNTLSGTLPKQKSLYLNTIDLSYNDLSGSLPSWVNESNLQLNLAVNNLTIDNSNSKGLPTGLNCLQKNFPCNRGVGRYSDFAIKCGGPQIRTADGIVYQTDNETLGPATYYVTDTNRWAVSNVGIFTRISNPLFKSNSSKQFTRTVNSELFQFARLSASSLRYYGLGLENGFYNITLQFAETAILDPTTWQSHGRRVFDIYIQGTRVLKDFDIQREAGGVSYRAVQKQFRFHVKENYVEVHLFWAGKGTCCIPAPGTYGPLIQAISATPDFVPTVSNKPPSSKKNRAGLIIGIVVGVGAVCFLAVFAIFYINRRRKLYGDDDDLFGIDTMPNTFSYSELKNATSDFNRDNKLGEGGFGPVYKGILNDGRDVAVKQLSIGSHQGKSQFVAEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENRSLDQALFGNVLFLNWSTRYDICMGVARGLTYLHEESRLRIVHRDVKASNILLDSELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALELVSGRPNSDSTLEGEKIYLLEWAWQLHEGNCINDLIDPRLSEFNKEEVQRLVGIALLCTQASPTLRPSMSRVVAMLSGDIEVGTVTSRPGYLTDWKFDDVSSIMTDISAKGLDTSNYNSTASTSIVGGAYIHSPSDPSKAILHDNIREGR 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05471 1031 FunFam Leucine-rich repeat transmembrane protein kinase 36 276 - -
Mepo3g05471 1031 SUPERFAMILY L domain-like 96 403 - -
Mepo3g05471 1031 Gene3D Phosphorylase Kinase; domain 1 666 765 - -
Mepo3g05471 1031 FunFam Leucine-rich repeat receptor-like protein kinase 660 765 - -
Mepo3g05471 1031 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 984 - -
Mepo3g05471 1031 FunFam Putative LRR receptor-like serine/threonine-protein kinase 277 400 - -
Mepo3g05471 1031 Pfam Protein tyrosine and serine/threonine kinase 693 957 IPR001245 GO:0004672|GO:0006468
Mepo3g05471 1031 CDD STKc_IRAK 696 957 - -
Mepo3g05471 1031 Pfam Malectin domain 424 609 IPR021720 -
Mepo3g05471 1031 Gene3D Ribonuclease Inhibitor 35 276 IPR032675 -
Mepo3g05471 1031 ProSiteProfiles Protein kinase domain profile. 690 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05471 1031 Gene3D Transferase(Phosphotransferase) domain 1 766 965 - -
Mepo3g05471 1031 SUPERFAMILY Protein kinase-like (PK-like) 673 972 IPR011009 -
Mepo3g05471 1031 Pfam Leucine rich repeat 290 348 IPR001611 GO:0005515
Mepo3g05471 1031 Gene3D Ribonuclease Inhibitor 277 409 IPR032675 -
Mepo3g05471 1031 FunFam Leucine-rich repeat receptor-like protein kinase 422 613 - -
Mepo3g05471 1031 ProSiteProfiles Leucine-rich repeat profile. 313 335 IPR001611 GO:0005515
Mepo3g05471 1031 SMART serkin_6 690 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05471 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Mepo3g05471 1031 FunFam Putative LRR receptor-like serine/threonine-protein kinase 766 969 - -
Mepo3g05471 1031 Gene3D - 424 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05471 Mepo-Chr3 68471455 68487189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05471 97 261 Receptor kinase-like Gene Family AT1G56120 24.868 2.94e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo3g05471 PK_Tyr_Ser-Thr 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05471 - - mtr:25502389 1677.92