LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g05470	ATGGAGCCACCCAAAAAGATAAACAAGAACAAGAACAAGGTGTGGTCACCCATAACGACAAACAAGAAGAACAACAAGGGTTGTGTACCCACTCAACTTCAACCTCAGCCCCAAACCCAACCTCACCCCCAACCTATTCCAAATATAACACAACCTCCACTCACTCAACCCCAACCTCAGCCTCAACCTATTCCGTATTTGATTCATTCTAAACTAGCTCCATCCCGACCACAACCTCAATCCCGGACTATTCCACCGTTGTTTCTATCTCAACCTCAATCCATCCCATCTCAACCCACTCAAGCTCAATCCATGTTTAGATCTATATCTCAATTCCAACATTCTCAACATCAACTTAAATCTACCCAATCACACCTACGACCACAATCCACACAATATCACCCTCCATTAACTCAACCTGAACCAAGTCAACCTCAATCTCGATCACGGTCTCAATCCACCCAACCTCACCCTCAATCCACTCAACCTCAACAAAGTCGACCTCTACCGCAGCCTCAATCCACCCAACCTCACCCTCAATCCACTCAACCTCAACGAAGTCAACCTCTACCGCAGCCTAAATCCACCCAATCTCACCCTCAATCCACTCAACCTCAACAAAATCAACCTAAAAAACGACCCATGCATACCCAAGTTATGGTCAATAGAGCTCCATCTTCAGCTAGCCATGTTAGTGGAGACACCGTTGGTACTAAAATACCAATAATTCCAGATGGTGATGGGTTTGATCACCACACATTGGTAGTTGAAGAAATTGCTCACATTATACGCTCTCAATTAGAAGAGGGAAAACCGTCATGGAAGAAATTGTCAGGAAATCACCGAGATGATTTCTTTAACTCATTCATGAAAACGTTTACATGGCAACCAGAGCATAAGGTAAAAGTGCGAAAAAACTTTGAAATAAGGGGTGCAGCTAAGATGTCTCAGTTGATGCAAGAAGTTCGGAAAAATTTGGAGGATAAACCAAGTTGGATGGGAGACGACGTTTGGAATGACTTGAAGCAATATTGGAAGTCCTCCACGTTCAAAAAAAAATCTCAAACAAATAAAAGAAATCGCAATTCTATGGCTAGTGCATCTCTTCACACTGGAGGATCAATCCCCCATCGTTTACATTGGAGTAAAATGAAAAAGGAAAAAGGTGCAGAACCGTCGTTGACTGAGTTTTACTGTTGTACACATCGCAAAAAGGATCAAAGTTGGGTGGGTGTGCATGTTGAATCTGCATATGACAAATTTGAACAAAAAAAGATGGACTTATCTACTCAGAATACCACATTTGGTCTAGGAGAGGATGAAGTTGACAGTCAACCAACCTATTATGAAATGCCAACTGATTTGGATATATGGGTAGATTCTGTTGGTAGAAAAAAAGGGAGGATATTTGGTCTTGGATCTTATTCAAAAACCTTGATTCCATCTTCAAATCAACAAACAAATACACATGCTAATTCAGAAGAGGTTGAATTTTTGAGAAGTCAAGTGCATGCTTTAAATGCATCATTGCAAAGACAAGAACAAGAGAAGTTGCAGATGAGGCAACAAATTGAATCAAATGAGCACATTGATGAAGAGGACAACAATGATTTTTTCGAAGATGTCGATGAAGATGACCATGATTTTGCTGAAGATGTTGATGAAGATAACAATAATAATGCTGGTGTTAGTGTGAATCCTAAGGGAGAAATGAAAGGTTCTGTTATCACAGGACCAATTGGTAAGGAGTGTGTTGATCTTTGGCCTAGGATTGCAAGTGCTGCCAATGCCATTGTATGA	1800	0.41	MEPPKKINKNKNKVWSPITTNKKNNKGCVPTQLQPQPQTQPHPQPIPNITQPPLTQPQPQPQPIPYLIHSKLAPSRPQPQSRTIPPLFLSQPQSIPSQPTQAQSMFRSISQFQHSQHQLKSTQSHLRPQSTQYHPPLTQPEPSQPQSRSRSQSTQPHPQSTQPQQSRPLPQPQSTQPHPQSTQPQRSQPLPQPKSTQSHPQSTQPQQNQPKKRPMHTQVMVNRAPSSASHVSGDTVGTKIPIIPDGDGFDHHTLVVEEIAHIIRSQLEEGKPSWKKLSGNHRDDFFNSFMKTFTWQPEHKVKVRKNFEIRGAAKMSQLMQEVRKNLEDKPSWMGDDVWNDLKQYWKSSTFKKKSQTNKRNRNSMASASLHTGGSIPHRLHWSKMKKEKGAEPSLTEFYCCTHRKKDQSWVGVHVESAYDKFEQKKMDLSTQNTTFGLGEDEVDSQPTYYEMPTDLDIWVDSVGRKKGRIFGLGSYSKTLIPSSNQQTNTHANSEEVEFLRSQVHALNASLQRQEQEKLQMRQQIESNEHIDEEDNNDFFEDVDEDDHDFAEDVDEDNNNNAGVSVNPKGEMKGSVITGPIGKECVDLWPRIASAANAIV	599

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g05470	599	Coils	Coil	496	530	-	-
	Mepo3g05470	599	MobiDBLite	consensus disorder prediction	350	378	-	-
	Mepo3g05470	599	SUPERFAMILY	Ribosomal protein L14	558	599	IPR036853	GO:0003735\|GO:0005840\|GO:0006412
	Mepo3g05470	599	Gene3D	Ribosomal protein L14	556	599	IPR036853	GO:0003735\|GO:0005840\|GO:0006412
	Mepo3g05470	599	PRINTS	Proline rich extensin signature	29	45	-	-
	Mepo3g05470	599	PRINTS	Proline rich extensin signature	74	95	-	-
	Mepo3g05470	599	PRINTS	Proline rich extensin signature	159	184	-	-
	Mepo3g05470	599	PRINTS	Proline rich extensin signature	50	62	-	-
	Mepo3g05470	599	PRINTS	Proline rich extensin signature	132	149	-	-
	Mepo3g05470	599	MobiDBLite	consensus disorder prediction	36	64	-	-
	Mepo3g05470	599	MobiDBLite	consensus disorder prediction	12	35	-	-
	Mepo3g05470	599	MobiDBLite	consensus disorder prediction	74	169	-	-
	Mepo3g05470	599	Pfam	Plant transposase (Ptta/En/Spm family)	335	477	IPR004252	-
	Mepo3g05470	599	MobiDBLite	consensus disorder prediction	178	216	-	-
	Mepo3g05470	599	MobiDBLite	consensus disorder prediction	1	216	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g05470	Mepo-Chr3	68459727	68462884	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g05470	559	599	Cytoplasmic Ribosomal Protein Gene Family	AT3G04400	90.244	2.21e-19	82.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g05470	-		-	gmx:102662101	394.815