Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05460 ATGGGTGCGAGTCTCGTTAATATGATCATGGAACCTTTGGGTTACAAGCGTTTTTTTAGGACACTGTTGGAAACTTCAGAGTATTTGAAGGATGATTGTCTTGTAATGCATTGCACCGTTGGTGTTGTGAAGACGCATTTTGAAGCATCTAAACAGGGTGTTATTGTGCCTGCTTCTAATATGGGTAGAGATTTCAAGAGTTTGTTTGAATCTCAAGTTGGTTGTGACATTGTTTTTAAGGTCAAGAGTGAAAGCTTTAAGGCTCATAAGCTGATTCTTGGTGCGAGGTCGCCTTTGTTTAGAGCTCAGTTTTTTGGACTTGTCAAGGATACTTGCTTAGAGGAAGTAGTGGTAGAGGAGATTGAGCTTATGTATTAG 378 0.3995 MGASLVNMIMEPLGYKRFFRTLLETSEYLKDDCLVMHCTVGVVKTHFEASKQGVIVPASNMGRDFKSLFESQVGCDIVFKVKSESFKAHKLILGARSPLFRAQFFGLVKDTCLEEVVVEEIELMY 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05460 125 Gene3D Potassium Channel Kv1.1; Chain A 41 124 IPR011333 -
Mepo3g05460 125 ProSiteProfiles BTB domain profile. 75 125 IPR000210 GO:0005515
Mepo3g05460 125 Pfam BTB/POZ domain 65 121 IPR000210 GO:0005515
Mepo3g05460 125 SUPERFAMILY POZ domain 57 121 IPR011333 -
Mepo3g05460 125 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 14 119 IPR045005 GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05460 Mepo-Chr3 68357069 68359633 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mepo3g05460 BTB 2.3e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05460 K10523 - gmx:100786636 169.088