Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05457 ATGGCTGGAATGTGTTGTGGTGTTGTCGGAGAAGGTGACTCACCGGCGAGTTCACGTCCCTCCCGGCGCCGGAATTTGGACTTACTACCATTCAAATACATCGCCGACATGGCGTCCGGAACTTCACGGAAACGCCGGCAACCAGATCTTAAGAAGGATTTCGAAAGCTGTGAAGACTCAAGCGACGACAAAAGTGAGAAAAGCAAGAAGAACAAGAAGGAAGATATAGAAAAACCTTCAACGGAAGGTAATTTCGAAGTTGAAGAATGTCCAAAATTCGGTGTTACTTCAGTTTGTGGTAGAAGAAGAGATATGGAAGATTCAGTTTCAGTTAAACCTTCTTTCTCTTCACAAGAACCTTTTCACTACTTCGGTGTTTTCGACGGTCACGGTTGTTCTCATGTTGCTACTATGTGTAAGGAAAGACTTCACGAAATCTTGAAGGAAGAAATCAACGAAGCACAAGAAAATTTGGAGTGGAACAACACCATGCAACAAGGGTTTGGTCGCATGGACGATGAAGTTCAAAGATGGAACAGCAGTAGCCAAACTGTTACTTGTAGATGCGAGCTTCAAACTCCTCACTGTGATGCTGTTGGATCCACAGCTGTTGTTGCTATTGTCACTCCAAACAAAATAATTGTCTCAAACTGTGGTGATTCAAGAGCTGTTCTTTGCCGTAACGGTGTCGCTATTCCTCTATCCTCCGATCATAAGCCAGATCGACCGGATGAATTACTCCGAGTCGAAGCAGCCGGAGGGCGCGTGATCTATTGGGATGGTCCAAGAGTCCTTGGAGTACTTGCCATGTCTAGAGCCATAGGTGACAATTATTTGAAACCTTATGTGATTTCTGAGCCTGAGGTAACGGTAACGGAACGGAAAGAAGAGGATGAGTGTTTGATCCTAGCGAGTGATGGACTATGGGATGTTGTGTCAAACGACACTGCATGTGGTGTTGTAAGGATGTGTTTGAAGGCACAGAAACTACCGTCACCGCCGGGGACACCGGAAAACAACGAGGTGACGACGGATGGTTCTGATAGGGCATGTTCCGATGCTTCAATTTTGTTGACTAAGTTGGCTTTGGCAAGACATAGTTCGGATAATGTTAGTGTGGTGGTGATTGATTTGAGGAGAGATCAACGACAAACATCAAATTCCAACAATAATTTAATTAATTAA 1185 0.4456 MAGMCCGVVGEGDSPASSRPSRRRNLDLLPFKYIADMASGTSRKRRQPDLKKDFESCEDSSDDKSEKSKKNKKEDIEKPSTEGNFEVEECPKFGVTSVCGRRRDMEDSVSVKPSFSSQEPFHYFGVFDGHGCSHVATMCKERLHEILKEEINEAQENLEWNNTMQQGFGRMDDEVQRWNSSSQTVTCRCELQTPHCDAVGSTAVVAIVTPNKIIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERKEEDECLILASDGLWDVVSNDTACGVVRMCLKAQKLPSPPGTPENNEVTTDGSDRACSDASILLTKLALARHSSDNVSVVVIDLRRDQRQTSNSNNNLIN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05457 394 CDD PP2Cc 92 378 IPR001932 -
Mepo3g05457 394 Coils Coil 137 157 - -
Mepo3g05457 394 ProSiteProfiles PPM-type phosphatase domain profile. 92 378 IPR001932 -
Mepo3g05457 394 MobiDBLite consensus disorder prediction 37 83 - -
Mepo3g05457 394 SUPERFAMILY PP2C-like 91 379 IPR036457 -
Mepo3g05457 394 MobiDBLite consensus disorder prediction 42 83 - -
Mepo3g05457 394 FunFam Protein phosphatase 2C 37 87 385 - -
Mepo3g05457 394 Gene3D - 87 388 IPR036457 -
Mepo3g05457 394 Pfam Protein phosphatase 2C 93 355 IPR001932 -
Mepo3g05457 394 SMART PP2C_4 80 376 IPR001932 -
Mepo3g05457 394 MobiDBLite consensus disorder prediction 1 25 - -
Mepo3g05457 394 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Mepo3g05457 394 PANTHER PROTEIN PHOSPHATASE 68 378 IPR015655 GO:0004722|GO:0006470
Mepo3g05457 394 SMART PP2C_SIG_2 104 378 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05457 Mepo-Chr3 68323376 68325392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05457 33 380 PP2C-type Phosphatase Gene Family AT2G29380 58.757 1.10e-141 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05457 K14497 - gmx:100776356 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05457 3 68323376 68325392 Mepo7g02177 7 32389155 32391365 ECH
Mepo3g05457 3 68323376 68325392 Mepo3g05457 3 68323376 68325392 ECH
Mepo3g05457 3 68323376 68325392 Mepo7g02177 7 32389155 32391365 PCT