Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05455 ATGGCAGAGAACAAATGTGCCCCCTCACCTTTCTCCCCAAACCCAATAAATGAATCCTCCAACCATGTGAGAATTATTCCCATTGAAATCCCTAATGGGAAAGATATCATTGAAGTATTAACCAACTTTTCTCAAGGTTGTCAAGCTGACCTAATAGTGTTTCAGGGTTCCGGTCCTCTCTCTGACATTACCCTGCTCCACCCGGTAACTCGTGCCCCAAATTTGCCCATGGAAGGGCCATTTCAGATGATATCTCTAACCGGAACACACATAAATTCCAATTGTGATCGTGTTCCCCCAGAATTCATCACTGATCCTACATGCTTGTCCTTTTCCATTTGCTTCTCTGGCCGTGATGGACAAATGCTTGGTGGAACCGTTGGTGGGAAGGTTCATGCTGCTGGTGTTGTGAGGGTTCAGGCTACTCTTTTCAACAAACTAGAGTTCTGTACGGAAATGCCCATTGATGAAACTCTTGGAGAAATCGAAGAGGATGACCCAATAAATGCTAATGGTGTCATCAACAATGCTGCACATGAATCCAACATCAATAACAACATTGTTGCTGATATGCCAGACTTGGATGGTTCAAATCAACCAAATTAG 606 0.4373 MAENKCAPSPFSPNPINESSNHVRIIPIEIPNGKDIIEVLTNFSQGCQADLIVFQGSGPLSDITLLHPVTRAPNLPMEGPFQMISLTGTHINSNCDRVPPEFITDPTCLSFSICFSGRDGQMLGGTVGGKVHAAGVVRVQATLFNKLEFCTEMPIDETLGEIEEDDPINANGVINNAAHESNINNNIVADMPDLDGSNQPN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05455 201 Pfam Plants and Prokaryotes Conserved (PCC) domain 24 145 IPR005175 -
Mepo3g05455 201 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 16 163 IPR014476 GO:0003680
Mepo3g05455 201 ProSiteProfiles PPC domain profile profile. 18 165 IPR005175 -
Mepo3g05455 201 SUPERFAMILY AF0104/ALDC/Ptd012-like 21 149 - -
Mepo3g05455 201 CDD DUF296 24 144 IPR005175 -
Mepo3g05455 201 Gene3D - 22 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05455 Mepo-Chr3 68288081 68288777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05455 28 172 AT-hook Motif Nuclear Localized (AHL) Family AT1G14490 28.289 5.25e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05455 - K04674 psat:127121089 155.992