Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05449 ATGAAAAGGAAACAAATCTTGCACTCACACAATGAAGTAGTACCATCATTTGGAACCATCAACAACAAGTCTTGGGAGGAAAAAGCTTTTGCAGAAGATGCAGCTAGGATACTTGGTGGATGTATATGGCCTCCAAGATCTTACTCATGTCACTTCTGTAAAAGAGAGTTTAGGTCTGCTCAAGCTTTAGGTGGTCACATGAATGTCCATAGAAGAGATAGAGCTAAGCTCAAACAAAGTCTTAGCCACCATAATGAATTAGAACTTCATTCTCATCACAAAAATCATTTTAAAACAAGCAGAGATAACTCTTCTACTTGGCCATCAACTACATCTACACAAGAAAACTGTTTTCAGCCAAACATATCTTCATATTCTTCTTCAATTAGATGGGGGAATAACCATATGGAATCTCCTGATTCTGAACAAGGGCTAGCTAAGGCAAGGGAACAAATTTTCAAAGGTTATAGCTGTAATGATTATGTTGAAACAAGTTTGTCTATGGGACAAAATAATTCAATGTTTGGCCAAAAATTGCAAACTGATGATGATTATTGTGGTGGGGACAAAGGCATAAATTATAAAAGACCAAAGACAGCTTCCATTTCTTCTTCACTGCCTGTCTTGCTCAAGCCATGTTTGAATGATAGATGTTTAACTTTTCAGTCTGCAGAGTTTGTGGTTGGAGTTAAGCCTGGAATAGAAGACTTGGATCTTGAACTCAGGCTTGGGAAACTAACACAGAAAGTTTAG 753 0.3745 MKRKQILHSHNEVVPSFGTINNKSWEEKAFAEDAARILGGCIWPPRSYSCHFCKREFRSAQALGGHMNVHRRDRAKLKQSLSHHNELELHSHHKNHFKTSRDNSSTWPSTTSTQENCFQPNISSYSSSIRWGNNHMESPDSEQGLAKAREQIFKGYSCNDYVETSLSMGQNNSMFGQKLQTDDDYCGGDKGINYKRPKTASISSSLPVLLKPCLNDRCLTFQSAEFVVGVKPGIEDLDLELRLGKLTQKV 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05449 250 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Mepo3g05449 250 MobiDBLite consensus disorder prediction 89 121 - -
Mepo3g05449 250 ProSitePatterns Zinc finger C2H2 type domain signature. 50 70 IPR013087 -
Mepo3g05449 250 PANTHER OS07G0101800 PROTEIN 21 245 - -
Mepo3g05449 250 Pfam C2H2-type zinc finger 48 72 - -
Mepo3g05449 250 MobiDBLite consensus disorder prediction 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05449 Mepo-Chr3 68222330 68223172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05449 24 80 C2H2 Transcription Factor Family AT2G37740 75.439 6.94e-25 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g05449 zf-C2H2_6 3.8e-06 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05449 3 68222330 68223172 Mepo7g02175 7 32366123 32366827 PCT