Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05445 ATGGCAAATCGTTGGTGGACTGGGAATGTGGCTATGGGTCACAGAGAATCAATGCCTTCATCACCATCTTCACTTCAACATCTGAAAAGAGAGCAAGAGTTGATGGAAAACAACAACAACAACGCAAACTCAACTCCGACAAACAGTAGCAACAGCAACAACAACAATAATGAAGAGGAAGACAACAACAATGAAGAGCAAAACCCATCTGAGCCAGGTAGTAGCAGTGGTGGTCGGAGGCCACGTGGGAGACCACCAGGATCCAAAAATAAACCCAAACCACCCATTGTTATAACCAAAGAATCCCCAAATGCGCTAAGAAGCCATGTATTGGAAATCAGTAGTGGTAGTGATGTGGCGGAGAGTATTGCCACCTTTGCTAACCGCCGTCACCGTGGTGTGTCGGTTTTGAGTGGGAGTGGCATTGTAGCTAATGTAACCCTTAGACAGCCGGCTGCTCCTGGTGGTGTTATTACTCTTCATGGAAGATTCGAGATACTTTCGCTTTCTGGAGCTTTTCTACCTCCGCCTTCTCCGGCTGGAGCTACTGGATTAACTGTTTATTTAGCTGGTGGTCAGGGGCAGGTTGTTGGTGGTTCTGTTGCAGGTCCTTTGGTTGCTTCTGGACCTGTTATGGTTATAGCTGCTACTTTTGCTAATGCTACTTATGAGAGGTTGCCCTTGGAGGATGAACAAGGTGGTGGTGATCAAGAGGAAATGCAAGTTCAAGTTCAACAATCTGGTGTGGATTCAGCAACTGTTGCAGCTGCAGTTACTAGTTCTTCTTCTCAAGGTTTGGAATTGGGTGAGCATCATCAACAACTACAACAGGTTTCAATGCCTATGTATAATTTGCCTCCAAATTTGTTGCATAATGGTACTCAAATGCCTCATGATGTGTTTTGGGGTCCTCCACCTCCTCGTCCTCCTCCTTCTTTCTGA 942 0.4597 MANRWWTGNVAMGHRESMPSSPSSLQHLKREQELMENNNNNANSTPTNSSNSNNNNNEEEDNNNEEQNPSEPGSSSGGRRPRGRPPGSKNKPKPPIVITKESPNALRSHVLEISSGSDVAESIATFANRRHRGVSVLSGSGIVANVTLRQPAAPGGVITLHGRFEILSLSGAFLPPPSPAGATGLTVYLAGGQGQVVGGSVAGPLVASGPVMVIAATFANATYERLPLEDEQGGGDQEEMQVQVQQSGVDSATVAAAVTSSSSQGLELGEHHQQLQQVSMPMYNLPPNLLHNGTQMPHDVFWGPPPPRPPPSF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05445 313 Coils Coil 25 45 - -
Mepo3g05445 313 MobiDBLite consensus disorder prediction 35 58 - -
Mepo3g05445 313 MobiDBLite consensus disorder prediction 14 28 - -
Mepo3g05445 313 MobiDBLite consensus disorder prediction 1 103 - -
Mepo3g05445 313 ProSiteProfiles PPC domain profile profile. 103 241 IPR005175 -
Mepo3g05445 313 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 45 303 IPR014476 GO:0003680
Mepo3g05445 313 CDD DUF296 107 218 IPR005175 -
Mepo3g05445 313 Gene3D - 106 243 - -
Mepo3g05445 313 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 219 IPR005175 -
Mepo3g05445 313 SUPERFAMILY AF0104/ALDC/Ptd012-like 103 231 - -
Mepo3g05445 313 Coils Coil 48 68 - -
Mepo3g05445 313 FunFam AT-hook motif nuclear-localized protein 106 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05445 Mepo-Chr3 68186916 68189063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05445 1 313 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 54.985 1.64e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05445 - - gmx:100791954 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05445 3 68186916 68189063 Mepo3g05445 3 68186916 68189063 ECH