Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05443 ATGGCAAATATACCTCTTTGTCTTCTTTGCATCATGGTCCTTCTAGCCTCAAACTTCATACAGTCTCATTCTCAGCAAGATGAGTTTTTCTATGCTGGATTCAATGAAGCTGCTACCAACATAACCTTCAATGGAGGTGCAGTGATTGAACACAGAGGCATAATTCGTTTAACAAATGACACTGAAAGAGTACTTGGTCATGCTTTTTATTCAACACCAATCCACTTCAAGAACAAAACCACCACCAAAGTTTTCTCCTTTTCAACTTCTTTTGCTTTTGCAATAGTCCCTCAGTATCCAAAACTAGGAGGACATGGCTTTGCCTTCACCATTTCACCTTCCAAAACACTCTCCAATGGTTATCCTAGTCAGTATCTAGGCCTTCTCAACCCACATGATTTAGGCAACTTTTCAAACCACTTATTCGCAGTTGAATTCGATACTGTCCAAGATTTCGAATTCAACGACATCAATGACAATCATGTTGGTATCAATCTTAACAACATGGTATCAAACAAATCAGTTAAAGCATGTTTTTTTGCTGATGGGTCAATTAATAAACAAGTTCAAGACCTCAACTTGAAGAGTGGTAGTGTGATTCAAGCATGGATCGACTATGATTCCTCAAGAAGCATTATAGAAGTTAGACTCTCACCAACTTCATCAAAACCAAGTTCACCAATCTTATCATATCAAGTAGATCTAACACCAATTTTCAAAGAAACTATGTATGTTGGGTTTTCTGCTTCAACAGGGTTACTCTCTGGCTCACACTATATATTGGGTTGGAGCTTCAAAATCAATGGAGAATCCAAAACTTTGTCTTTGAAAAATCTTCCTTTACTCTCTTCACACAATACTCGAACTCGAAAGGCCTTAATCCTGGGTCTTACTATTTCATTTGTGATTCTAATAGTTTTAACAACTGGCTTAGCTTTTTACTTCAAGATGAAAAACAATGATGTTATAGAAGCTTGGGAACTAGAAGTGGGACCACATAGATTTCCTTACAAGGAACTGAAGCAAGCTACAAGAGGGTTCAAGGACAAGAACCTTCTTGGGTTTGGTGGTTTTGGTAAAGTTTACAAAGGAGTGTTACCAGATTCCAAAACTGAAATAGCTGTGAAACAAATCTCCCAAGAATCAAGACAAGGGTTGCAAGAGTTTATCTCAGAAATTGAAACCATTGGTAAACTTCGTCACAGGAACCTAGTACAGTTACTAGGTTGGTGTCGGAAGCGAAATGATTTAATCTTAGTGTATGATTTCATGGAAAATGGGAGTTTAGATAAGTATATATTTGAACAACCAAGAGCAATATTGAGGTGGGAAGAAAGGTTTAGGATCATAAAAGGTGTGGCTTCAGGGCTTGTTTATTTGCATGAGGAATGGGAACAAACAGTGATTCACAGAGATGTGAAAGCAGGGAATGTTCTTTTGGATTCTGAGATGAATGCAAGATTAGGTGATTTTGGCTTGGCAAAGCTTTATGATCATGGTGAGAATCCAAGCACGACGAGGGTGGTGGGAACTTTGGGGTATTTAGCACCCGAGTTAACGAGAACAGGGAAACCAACAACGAGTTCTGATGTGTTTGCGTTTGGGGCATTGTTGTTGGAAGTGGTTTGTGGGAGAAGACCTATTGAGCCTAAAGCATTGCCCGAGGAGCTTGTTTTGGTGGATTGGGTTTGGGATAGGTTAAGGTTAGGGGCGGCTTTGGAGGTTGTGGATCTTAAGTTGGGCGGGGTTTATGATGAGGTGGAGGTTCTACTGGTGATTAAGGTGGGGTTGTTGTGTTCTGAAGATTCACCAGAACGGAGGCCTACAATGAAGCAGGTGATTAGGTACTTGGAGGGGGAGTTGCCGTTGCCGGAACTTGATGTTTTTGGTGTGAAAAAGGGTGGTGGTGGTCGTCAGTTTGAGGGAATGTATCCAATGTCGCCATTCTTTGAAAGCGCAAATACATGGTCGTCAGCGGGTGGATATGATTCGTCTCTTTCACTTTCCGGTGGCCGATAG 2019 0.4071 MANIPLCLLCIMVLLASNFIQSHSQQDEFFYAGFNEAATNITFNGGAVIEHRGIIRLTNDTERVLGHAFYSTPIHFKNKTTTKVFSFSTSFAFAIVPQYPKLGGHGFAFTISPSKTLSNGYPSQYLGLLNPHDLGNFSNHLFAVEFDTVQDFEFNDINDNHVGINLNNMVSNKSVKACFFADGSINKQVQDLNLKSGSVIQAWIDYDSSRSIIEVRLSPTSSKPSSPILSYQVDLTPIFKETMYVGFSASTGLLSGSHYILGWSFKINGESKTLSLKNLPLLSSHNTRTRKALILGLTISFVILIVLTTGLAFYFKMKNNDVIEAWELEVGPHRFPYKELKQATRGFKDKNLLGFGGFGKVYKGVLPDSKTEIAVKQISQESRQGLQEFISEIETIGKLRHRNLVQLLGWCRKRNDLILVYDFMENGSLDKYIFEQPRAILRWEERFRIIKGVASGLVYLHEEWEQTVIHRDVKAGNVLLDSEMNARLGDFGLAKLYDHGENPSTTRVVGTLGYLAPELTRTGKPTTSSDVFAFGALLLEVVCGRRPIEPKALPEELVLVDWVWDRLRLGAALEVVDLKLGGVYDEVEVLLVIKVGLLCSEDSPERRPTMKQVIRYLEGELPLPELDVFGVKKGGGGRQFEGMYPMSPFFESANTWSSAGGYDSSLSLSGGR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05443 672 SMART serkin_6 347 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05443 672 FunFam L-type lectin-domain containing receptor kinase S.4 25 273 - -
Mepo3g05443 672 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Mepo3g05443 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Mepo3g05443 672 CDD lectin_legume_LecRK_Arcelin_ConA 28 269 IPR001220 GO:0030246
Mepo3g05443 672 FunFam L-type lectin-domain containing receptor kinase S.4 424 629 - -
Mepo3g05443 672 CDD STKc_IRAK 353 619 - -
Mepo3g05443 672 Gene3D Transferase(Phosphotransferase) domain 1 424 628 - -
Mepo3g05443 672 SUPERFAMILY Protein kinase-like (PK-like) 329 624 IPR011009 -
Mepo3g05443 672 Gene3D - 25 268 - -
Mepo3g05443 672 ProSiteProfiles Protein kinase domain profile. 347 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05443 672 Pfam Protein kinase domain 347 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05443 672 Pfam Legume lectin domain 27 277 IPR001220 GO:0030246
Mepo3g05443 672 ProSitePatterns Protein kinases ATP-binding region signature. 353 376 IPR017441 GO:0005524
Mepo3g05443 672 PANTHER - 40 622 - -
Mepo3g05443 672 FunFam L-type lectin-domain containing receptor kinase S.1 332 423 - -
Mepo3g05443 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 282 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05443 Mepo-Chr3 68165379 68167561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05443 28 626 Receptor kinase-like Gene Family AT3G55550 61.221 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mepo3g05443 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05443 - - gmx:100787552 922.539