Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05438 ATGAGTTTTGTTTTTCGAGGAGCAAGAGCTGATATAGAAAATGGGTTTCCAGGATTTATACCTGAGAGGCGTGCATTGCGTGTTCATGCAGCACGTCCTAGTAATTCCAACTCACTCACTTTTCTCGTAACAGTTCTCCTGTTATTCATGATACTGAACTCTCACCAGATGTCACCAAATTTTCTGCTCTGGCTGGTGCTTGGTGTTTTCTTGATGGCTACAATGCTAAGGATGTATGCAACATGTCAACAGCTTCAAGCACAAGCCCAAGCTCATGCAGCAGCAGCCAGTGGCCTTCTTGGCCACACAGAACTACGGTTGCATATGCCTCCATCGATAGCACTTGCAAGCCGAGGGCGTCTGCAGGGTCTCAGACTTCAGCTGGCACTTCTTGATCGGGAGTTTGATGATCTAGATTATGAAACTTTAAGAGCTCTGGATTCGGATAATGTTTCTACTGCACCTTCTATGACTGAGGAAGAGATAAATGCTCTTCCTGTCCATAAATACAAGGTTTCTGGTCCCCAAAAAAGTAGTTCCTCAATGCAACAAGCAACGCCTTCCACTTCTGCTGAGAAGACACAGGATAATTCAAATGCGGTTGGAAACTCAAAAGCCTCTGATGATGAGCTCACTTGCAGTGTATGCTTGGAGCAAGTTAATGTTGGAGATGTACTTCGTAGCTTGCCCTGCCTGCATCAGTTTCACGCTAGTTGCATTGATCCCTGGCTGCGGCAACAAGGGACTTGCCCTGTCTGCAAATTTCGAGCAGGATCTGGGTGGAATGACAGTGGACATAATGATATTTCGGACATGGTTTGA 822 0.4586 MSFVFRGARADIENGFPGFIPERRALRVHAARPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALASRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTAPSMTEEEINALPVHKYKVSGPQKSSSSMQQATPSTSAEKTQDNSNAVGNSKASDDELTCSVCLEQVNVGDVLRSLPCLHQFHASCIDPWLRQQGTCPVCKFRAGSGWNDSGHNDISDMV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05438 273 MobiDBLite consensus disorder prediction 173 206 - -
Mepo3g05438 273 ProSiteProfiles Zinc finger RING-type profile. 213 254 IPR001841 -
Mepo3g05438 273 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 188 259 IPR013083 -
Mepo3g05438 273 SUPERFAMILY RING/U-box 207 257 - -
Mepo3g05438 273 MobiDBLite consensus disorder prediction 164 206 - -
Mepo3g05438 273 CDD RING-H2_PA-TM-RING 212 254 - -
Mepo3g05438 273 PANTHER TARGET OF ERK KINASE MPK-1 1 259 - -
Mepo3g05438 273 Pfam Ring finger domain 212 254 IPR001841 -
Mepo3g05438 273 SMART ring_2 213 253 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05438 Mepo-Chr3 68121990 68127537 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05438 1 273 C3H Transcription Factor Family AT3G55530 77.899 6.28e-147 410
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05438 3 68121990 68127537 Mepo3g05438 3 68121990 68127537 ECH