Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05430 ATGGATGCACACTTGGGAGATTTTGGATTGGCAAAAGCAATCATTGAGAGTCTTGATTCTAATACCGAGTCTACTTCTTGTTTCGCAGGATCTTATGGTTACATAGCTCCAGAATTCGGATACTCTTTGAAGGCCACAGAGAAAAGCGATGTATACAGCATGGGAATTGTGCTTATGGAACTTGTTAGTGGTAAATTGCCAACTGATGCAGCATTTAGAGGAGGTATAGACATGGTGAGATGGGTGGAGATGCACATTAACATGAAAGGAACTGAACGTGAGGAACTCATAGATCCTGAAGCTCAAACCCCTCTTACCTTATGA 324 0.4198 MDAHLGDFGLAKAIIESLDSNTESTSCFAGSYGYIAPEFGYSLKATEKSDVYSMGIVLMELVSGKLPTDAAFRGGIDMVRWVEMHINMKGTEREELIDPEAQTPLTL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05430 107 Pfam Protein kinase domain 4 70 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05430 107 Gene3D Transferase(Phosphotransferase) domain 1 1 106 - -
Mepo3g05430 107 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05430 107 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 100 - -
Mepo3g05430 107 SUPERFAMILY Protein kinase-like (PK-like) 3 101 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05430 Mepo-Chr3 67970462 67971019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05430 1 98 Receptor kinase-like Gene Family AT1G08590 50.000 3.60e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g05430 Pkinase 9.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05430 - - gmx:100819046 162.925