Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05425 ATGGCAAAAGATGGACCAGAAGGTGGTAAGAGTCATGTCTCTACAAGGATAATGGGCACACCAGGCTATGCAGCTCCTGAGTATTTAGCCACAGGTCACCTAACCAAAAAGAGCGATGTATACAGTTTTGGGGTCGTTCTCCTAGAAATTATGTCAGGCAAACGTGTATTGGATAAAAACCGGCCGTCTGGAGAGCATGATTTAGTTGCATGGGCCAAGCCATTACTCATGAACAAACGCAAAATTTCTCAAGTCATGGATGCTCGTATAGAAGGCCAATACTCGTCGCGTGAAGCAATTAAAGTAGCTCATGTTGCAATTCGATGCCTGTCGGCAGAACAAAAATATAGACCAAACATTGACGAGGTGGTGAGATCGTTGGAACAACTTCAGGAATCCAATGACAAAACAAATGGTCATAGCTCAGGCAGCAGTGGTTCCAAACAACATGGTAAAAGCGTCGATGAATCTTTAAGCGGTGAAGGTACTTCTAATATGAGTTCATCTGCTGCTTCTCCTCTCCATCAGTAG 531 0.4407 MAKDGPEGGKSHVSTRIMGTPGYAAPEYLATGHLTKKSDVYSFGVVLLEIMSGKRVLDKNRPSGEHDLVAWAKPLLMNKRKISQVMDARIEGQYSSREAIKVAHVAIRCLSAEQKYRPNIDEVVRSLEQLQESNDKTNGHSSGSSGSKQHGKSVDESLSGEGTSNMSSSAASPLHQ 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05425 176 PANTHER OS01G0588500 PROTEIN-RELATED 1 131 - -
Mepo3g05425 176 SUPERFAMILY Protein kinase-like (PK-like) 8 127 IPR011009 -
Mepo3g05425 176 Gene3D Transferase(Phosphotransferase) domain 1 1 154 - -
Mepo3g05425 176 MobiDBLite consensus disorder prediction 131 176 - -
Mepo3g05425 176 ProSiteProfiles Protein kinase domain profile. 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05425 176 Pfam Protein kinase domain 14 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05425 Mepo-Chr3 67855058 67857185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05425 1 169 Receptor kinase-like Gene Family AT4G02010 41.420 6.62e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo3g05425 Pkinase 8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05425 - - var:108326804 223.787