Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05422 ATGAAGATAGCTCTTGATGCTGCTAAGGGTCTTGCATTTCTTCACAGCGATGAAGTCGAAATGATACATGGAGACTTCAAAACATCTAAAATCTTGATTGATTCTCTGCTCTCTTCTGGTTGCATTGTTCTTGAATTAGCTCTATGTTCATGGCTTGCTGCTTTAGGACAAGGGTCAAAGTTGAGAGTCCTGCACATAATGGCAAAAATCAATTACCTTGGGGAGCTTCGTCATCCTAATCTCGTGAAACTGATTGGTTACTGCTTAGACGATTCCTATTGGATTTTAGTATATGAATTTGTGGCCAAAGGAAATTTGGTTAATCATTTGTTTAGACGCTTTTCTAACATTCTACCACTCGCTTGGAAAATTCGTATGAAGATAGCTCTTGATGCTGCCAAGGGTCTTGCATTTCTACACAGTGATGAAGTGGGAAAGATACATGGAGACTTCAAAACTTCAAAAATCTTGATTGATTCAAACTATGATGCAAAACTATCCTTCTTTGGGTTGGGAAAAGGTAGATCAGATAGTAATATGTCCGACTACGATATGGTGGATATGGGCCCTCAAATTAACACGACACTTGAGTATATAGACACAGGTACCAAATTCTTTTTCAAGTCAATATTGGCAGTTTCAGTTTTCTTTATACGATGTCCTTTGACATGGCCCCTCCGCATATGTGATCTGCTCTCTTCTGGTTGCATTGTTCTTGAATTAGCTCTATGTTCATGGCTTGCTGCTTTAGGACAAGGGTCAAAGTTGAGAGTCCTGCACATAATGGCAAAAATCAATTACCTTGGGCAGCTGCGTCATCCTAATCTCGTGAAACTGATTGGTTACTGCTTAGACGATTCCTATCGGATTTTAGTATATGAATTTGTGGCCAAAGGAAATTTGGGTGATCATTTGTTTAGAAGATTTTCTAACTTTCTACCACACGCTTGGAAAATTCGTATGAAGATAGCTCTTGATGCTGCCAAGGGTCTTGCATTTCTACACAGTGATGAAGTGGGAAAGATACATGGAGACTTCAAAACTTCAAAAATCTTTATTGATTCAAACTATGATGCAAAACTATCCTTCTTTGGGTTGGTAAAAGATAGACCAGATAGTAATATATCCGACTACGATATAGTGGATATGGGCCCTCAAATTAATGCGACACTTGAGTATATAGACACAGATCACCTAACCAAGGAGAGTGATGTATACAATTTTGGGGTTGTTCTCCTTGAAATTATGTCAGGCAAACGTGCATTGGATAGAGACAGACAACTTCGGGAACATAATTTAGTTGAATGGGCCAAGCCATTACTCAAAAGCAAACATGGAATCTCTCAAGTCATAGATGTTCGTATAGAAGGCCAATACTCCTCGCGTGAAGCAAAGAAATTAGCTGAGGTTGTAATTCAATGTCTGTCTAAAAGACCAAAAATAGAAGAGATTGTGAGATCATTGGAAAAACTTCAGGATTCCAATGACACAATTGGTGGAGTGGGGAGCTCTTAA 1515 0.3888 MKIALDAAKGLAFLHSDEVEMIHGDFKTSKILIDSLLSSGCIVLELALCSWLAALGQGSKLRVLHIMAKINYLGELRHPNLVKLIGYCLDDSYWILVYEFVAKGNLVNHLFRRFSNILPLAWKIRMKIALDAAKGLAFLHSDEVGKIHGDFKTSKILIDSNYDAKLSFFGLGKGRSDSNMSDYDMVDMGPQINTTLEYIDTGTKFFFKSILAVSVFFIRCPLTWPLRICDLLSSGCIVLELALCSWLAALGQGSKLRVLHIMAKINYLGQLRHPNLVKLIGYCLDDSYRILVYEFVAKGNLGDHLFRRFSNFLPHAWKIRMKIALDAAKGLAFLHSDEVGKIHGDFKTSKIFIDSNYDAKLSFFGLVKDRPDSNISDYDIVDMGPQINATLEYIDTDHLTKESDVYNFGVVLLEIMSGKRALDRDRQLREHNLVEWAKPLLKSKHGISQVIDVRIEGQYSSREAKKLAEVVIQCLSKRPKIEEIVRSLEKLQDSNDTIGGVGSS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05422 504 Gene3D Phosphorylase Kinase; domain 1 249 296 - -
Mepo3g05422 504 Gene3D Transferase(Phosphotransferase) domain 1 297 499 - -
Mepo3g05422 504 Gene3D Transferase(Phosphotransferase) domain 1 1 47 - -
Mepo3g05422 504 Gene3D Transferase(Phosphotransferase) domain 1 52 243 - -
Mepo3g05422 504 PANTHER OS01G0588500 PROTEIN-RELATED 1 35 - -
Mepo3g05422 504 ProSiteProfiles Protein kinase domain profile. 165 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05422 504 SUPERFAMILY Protein kinase-like (PK-like) 61 181 IPR011009 -
Mepo3g05422 504 SUPERFAMILY Protein kinase-like (PK-like) 2 35 IPR011009 -
Mepo3g05422 504 Pfam Protein tyrosine and serine/threonine kinase 260 438 IPR001245 GO:0004672|GO:0006468
Mepo3g05422 504 Pfam Protein tyrosine and serine/threonine kinase 65 180 IPR001245 GO:0004672|GO:0006468
Mepo3g05422 504 SUPERFAMILY Protein kinase-like (PK-like) 256 493 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05422 Mepo-Chr3 67827074 67836658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05422 264 504 Receptor kinase-like Gene Family AT3G58690 39.526 1.02e-49 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo3g05422 PK_Tyr_Ser-Thr 2.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05422 - - gmx:100800735 310.457