Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05409 ATGAGTTTCACCATAGAAACCAACACTAACATTTCCAACACACACTCATCACCATCTTCTCTAGTTCTCACAAACCACCACAACAAAACCAAAAGCAACCTCAAATTTCGACACTTTATACGAAAAATGATCTTTGAATTCGGTTTTTCATGTGTTGGTGTTAAAAACCCATCAAAGAAAACCCACAAAAACGATGAAAATGGTTACAAAAAAACAACAACCTCAGAACACAACAAAGCATGGTTGTTAGCTGAGTCTGGTGGGTGTGGAGCAGAATTGATGAACAATGCAGAACCACAATCTGTTCATTCAAGTTTCAGGTTTAGTTTCTGTTCTCAAGTTGAGTTGGAAAGTTTGAATTTGAGTTCTTCAAATGCTGCAACTGTTTTGATGGTGAATTTGGATAATGGGGTTAGTGAATCTCTTGTTAAGGAGTTGAAGTTGAGGAGAATTGAGTCTTTGGAGAAGACTATTTCTCCTGTTGCTCATTCTTTGGTTAGGTTTAGTTATGGTGAGATTGTGTATGCTACTAGGAATTTCTCTAAAGGTAGGGTGTTGGGGAGAGGTGCATTGAGCTGTGTTTTTAGGGGAAGAGTTGGGCTTTTGAGAACCGCTGTTGCAATTAAGCAGTTGGACAAGGAAGATAAGGAATCTGCTAAGGCCTTTTGTAGAGAATTGATGATTGCTAGTTCGCTTCATAATCCAAATGTTGTTCCTCTTGTTGGTTTTTGTATTGACCCTGAGGAGGGTTTGTTTTTGGTGTACAAGTATGTCTCAGGAGGAAGCTTGGAGCGCCACTTGCACGGGAGGAAGAAAGGTGGGAAGGGTAGTTCAACACTCCCTTGGTCTGTTAGGTACAAGGTTGCAGTTGGGATTGCAGAAGCTATGGCTTATCTCCATAATGGAACTGAAAGATGTGTTGTTCATAGAGACATTAAGCCCTCTAACATTCTTCTTTCTTCTAAGAAGGCTCCGAAGTTATGTGATTTCGGATTAGCTACATGGACTTCTGCACCTTCAGTTCCTTTCCTTTGCAAAACTGTCAAAGGAACATTTGGATATTTGGCCCCTGAGTACTTCCAACACGGGAAAGTATCCGATAAGACTGATGTTTATGCTTTTGGAGTGGTTTTATTGGAACTCATTACTGGACGGAAACCTATTGAAACGAAAAGGTCTCCGGGAGAGGAGAATCTAGTCTTATGGGCTAAACCATACTTACAAAAGGGGAAAGGAGCCATTGAAGAGTTGCTCGATCCTCAACTGAAGTGCAATTTGAGATTCTCAAATCAAATCGGTAGAATGATTGAAGCTGCAGCTGCTTGTGTCACAAATGAAGAATCTAGAAGACCTAGCATACATGAGATTATTGCCATACTGAAAGGTGAAGAAGAACTTATTGTCTCCAAAAGAAAAAAGTCAAGTTTTCTTGGAAATGGGTGCGTGATCGATTGTTATTCTCAATTACAACAACCGAATAACGAGATGAAAAGTCACCTGGCTTTGGCAATGCTAGGAGTTTCAGAGTTTGAGGATGATGATTATCTCTATGTATGTTAG 1560 0.4006 MSFTIETNTNISNTHSSPSSLVLTNHHNKTKSNLKFRHFIRKMIFEFGFSCVGVKNPSKKTHKNDENGYKKTTTSEHNKAWLLAESGGCGAELMNNAEPQSVHSSFRFSFCSQVELESLNLSSSNAATVLMVNLDNGVSESLVKELKLRRIESLEKTISPVAHSLVRFSYGEIVYATRNFSKGRVLGRGALSCVFRGRVGLLRTAVAIKQLDKEDKESAKAFCRELMIASSLHNPNVVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRKKGGKGSSTLPWSVRYKVAVGIAEAMAYLHNGTERCVVHRDIKPSNILLSSKKAPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIETKRSPGEENLVLWAKPYLQKGKGAIEELLDPQLKCNLRFSNQIGRMIEAAAACVTNEESRRPSIHEIIAILKGEEELIVSKRKKSSFLGNGCVIDCYSQLQQPNNEMKSHLALAMLGVSEFEDDDYLYVC 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05409 519 FunFam Putative receptor-like serine/threonine-protein kinase 258 476 - -
Mepo3g05409 519 Pfam Protein kinase domain 181 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05409 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Mepo3g05409 519 PANTHER OS08G0249100 PROTEIN 38 475 IPR046958 -
Mepo3g05409 519 FunFam probable serine/threonine-protein kinase PBL7 141 257 - -
Mepo3g05409 519 ProSiteProfiles Protein kinase domain profile. 180 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05409 519 Gene3D Phosphorylase Kinase; domain 1 151 257 - -
Mepo3g05409 519 SMART serkin_6 180 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05409 519 Gene3D Transferase(Phosphotransferase) domain 1 258 477 - -
Mepo3g05409 519 MobiDBLite consensus disorder prediction 1 22 - -
Mepo3g05409 519 SUPERFAMILY Protein kinase-like (PK-like) 160 460 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05409 Mepo-Chr3 67677326 67680886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05409 168 466 Trihelix Transcription Factor Family AT1G70460 42.193 8.03e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mepo3g05409 Pkinase 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05409 - - psat:127083811 829.706