Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05383 ATGGCACCAGAATACACATTATATAAGAACTACCCCATATATCTCTATTCTTCTCTCCACCTCTCTCCCCTTCTCTCTCGTTTTGGTACGTATGCAACCATGCGTCCACCAATGAGGAGAGTTAACTATCGAGTAGGAGACCTAGTTGAAGTATGCATCAAAGATGAAGGGTTTTGGGGCTCGTACTTTGAGGCCAAAATTGTTGCATGCCTCGAGAAAGGGGAATATGTGGTTCGTTACAAGAACCTTCTTGAGGATGATGAATCTGGACCTCTCGAGGAGACACTTTTATCAAAGGACCTTCGTCCAATACCACCATCTGTCCAAAATCCTCCTGAGTTCCAACTCAACCAAAAGGTTGATGTTTTCTGCAACGATGGATGGTGGTTAGGGAAAATCACTAGCAATAAGGTCTTCAGGCGAAACCATTATTACATTTGGGTGTACTTTCCCACTATCCCTATAAGGAGGTTATGCCGTTGTGATCAGATCCGAGTTCATCATGAGTTGTCTGGAGGAGATTGGATCATATAA 534 0.4345 MAPEYTLYKNYPIYLYSSLHLSPLLSRFGTYATMRPPMRRVNYRVGDLVEVCIKDEGFWGSYFEAKIVACLEKGEYVVRYKNLLEDDESGPLEETLLSKDLRPIPPSVQNPPEFQLNQKVDVFCNDGWWLGKITSNKVFRRNHYYIWVYFPTIPIRRLCRCDQIRVHHELSGGDWII 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05383 177 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 43 176 - -
Mepo3g05383 177 CDD Tudor_Agenet_AtDUF_rpt1_3 43 106 - -
Mepo3g05383 177 SMART agenet_At_2 41 109 IPR014002 -
Mepo3g05383 177 SMART agenet_At_2 112 172 IPR014002 -
Mepo3g05383 177 Pfam Agenet domain 46 106 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05383 Mepo-Chr3 67315496 67316029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05383 11 131 PHD Transcription Factor Family AT5G58610 25.714 9.26e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05383 - - mtr:11418635 234.958