Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05373 ATGGGAAGACAACCATGTTGTGACAAAGTTGGATTGAAGAAAGGACCATGGACTGCTGAGGAAGATAAAAAGCTCATCAATTTCATCCTTACTAATGGTCAATGTTGCTGGAGAGCTGTCCCTAAGCTAGCAGGGTTGTTAAGGTGTGGAAAAAGTTGCAGATTGAGATGGACAAATTACCTAAGGCCAGACCTAAAAAGAGGACTTTTATCAGAATATGAAGAGAAAATGGTCATTGATCTTCACGCTCAACTTGGCAACAGATGGTCTAAAATTGCTTCTCATCTACCCGGACGAACCGACAATGAGATTAAGAATCATTGGAATACTCACATAAAGAAAAAGCTCAAGAAAATGGGAATTGATCCGGTTACACACAAGTTACTCTCTAATGCAACAATTGAGCAAACTCAAACACAATCTGAACAAGAACCTCAACAACAATCTTCTTCACCTATTGAAATGGAACACAATGTTGAATTTGAGAATGACAAAAACAAGGAACCACAAAGACCAGAAACATCATTTGAGTCATCAACAATAACTGAAGCTAAAGAACAAGACCAAATTATGACACCACTTTTTGACTCAACAATGGAACTAATGAATGAGTTATTCACTGAAGAAGTTCCAATAATAACAATACCAAATGAAATTCTTGTTCCATGTGTCCCTTCATCTTCATCAACCACAACATCAACATCATCATCAACTTCAAATTCAAATTCATCTAACTTCCTTGAAGACTTGCTTCTCCCAGATTTTGATTGGTCCCATGATAATAATATTGGAAATAGTGACAATAATAATAATATTAATATGACATTATGGGATGATGACTTTATTAGAAGTTGGGATTTTGTGATCAATGATGATGATGATGGTGACATGAATTCAAGAGTGGTCATGGATTCAGAATCATGGGCCTATGGATTATTTTGA 942 0.3599 MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKLLSNATIEQTQTQSEQEPQQQSSSPIEMEHNVEFENDKNKEPQRPETSFESSTITEAKEQDQIMTPLFDSTMELMNELFTEEVPIITIPNEILVPCVPSSSSTTTSTSSSTSNSNSSNFLEDLLLPDFDWSHDNNIGNSDNNNNINMTLWDDDFIRSWDFVINDDDDGDMNSRVVMDSESWAYGLF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05373 313 SMART sant 66 114 IPR001005 -
Mepo3g05373 313 SMART sant 13 63 IPR001005 -
Mepo3g05373 313 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo3g05373 313 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 226 - -
Mepo3g05373 313 FunFam MYB transcription factor 11 67 - -
Mepo3g05373 313 CDD SANT 16 61 IPR001005 -
Mepo3g05373 313 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo3g05373 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo3g05373 313 Gene3D - 11 67 - -
Mepo3g05373 313 Gene3D - 70 154 - -
Mepo3g05373 313 MobiDBLite consensus disorder prediction 161 188 - -
Mepo3g05373 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo3g05373 313 FunFam Myb transcription factor 71 133 - -
Mepo3g05373 313 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Mepo3g05373 313 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo3g05373 313 CDD SANT 74 112 IPR001005 -
Mepo3g05373 313 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo3g05373 313 MobiDBLite consensus disorder prediction 173 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05373 Mepo-Chr3 67244541 67246809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05373 1 313 MYB Transcription Factor Family AT5G16600 47.429 6.19e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g05373 Myb_DNA-binding 8.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05373 K09422 - gmx:100803624 459.529