Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05361 ATGGAAGGTCGTTGGGGAAGAACATTTTATGAAGAAATGTCAGCTGCGGAGAGCAAGCGAGAGAAGCTAGCGGGCTTGTCTCTTGACGACATCTTAGTGAATCAACAAAGACCCGGCTCTACACCGCCAAGCTCGACAACGCCAAGGCAACCACCCCCTAAAAGTCGAACCCTCATAGACATCATCAAAGACGACGAAAGTAACAAAAAAGATCGCAGATCTTGGAAAGCCTTTAAAGACAAGCTTCGGCTAAAGCGTGCTGGCTCTGCTTGGACATCATCAATTCCCATTCCAACATCAGACATCCCTATCCAAAATCCAAACAGCAGAAGCTTTTCACAATTCGGTCGTCGCAACTCAGTTCGAGTCCAAACTCATCACGACTCAGACATGTCAACACACCAAGTAGATGACCTCGATCCATCAGATGAATCCAATGCTCCAGCTAGCAGGCCAAAATTCACTCGTGGGAGCTCAACTCGGTTCACGACAGATTCCTCTGAGAATACTAGTGTAGGAAATCTCCGGCCACAACTATCACGCAAGAATTCCAGTAGTGTGTCGTCGGATCCATTCCGAAAAGGGCGTGTAGTGACTTTTCGAGACAGCTTTGGCGATGAGGAATCAGACGATGATGCCAAGCATCCAGAGACGGGGAGGGCATTATCGGCGAGAGAAGCAGTGGCGGCACAAGAAGCAGCAGAAGCTGCAGCGGAGGCTGAGGCCGAGGCTGCAACAGGACCTCCGACAATGTCGTTGATGGATTTGTTAGGGGAGACTGATAGAGAGATGGGGCTGGAAGGGTCAAGGTATATATTAAGTGATGAGGAAGATTTTTCTGATGCTGATTATGACGAAGGTGAAGATGTTGAAGATGGGGAAAGTGCATTGGAACACACTTGTTCTATTTGCATGGTGAAGCATAAGGGTACTGCTTTGGCAGCTTGTGGCCATAGTTTTTGTAGGATGTGTTCAAGGGAGCTTCTGGTTTCTAAGGGAAATTGTCCACTTTGTAATAATTTCGTTTTAGAGATTCTTGAGATTTTCTGA 1050 0.4724 MEGRWGRTFYEEMSAAESKREKLAGLSLDDILVNQQRPGSTPPSSTTPRQPPPKSRTLIDIIKDDESNKKDRRSWKAFKDKLRLKRAGSAWTSSIPIPTSDIPIQNPNSRSFSQFGRRNSVRVQTHHDSDMSTHQVDDLDPSDESNAPASRPKFTRGSSTRFTTDSSENTSVGNLRPQLSRKNSSSVSSDPFRKGRVVTFRDSFGDEESDDDAKHPETGRALSAREAVAAQEAAEAAAEAEAEAATGPPTMSLMDLLGETDREMGLEGSRYILSDEEDFSDADYDEGEDVEDGESALEHTCSICMVKHKGTALAACGHSFCRMCSRELLVSKGNCPLCNNFVLEILEIF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05361 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 347 IPR013083 -
Mepo3g05361 349 PANTHER OS01G0917900 PROTEIN 19 349 - -
Mepo3g05361 349 MobiDBLite consensus disorder prediction 92 120 - -
Mepo3g05361 349 ProSiteProfiles Zinc finger RING-type profile. 301 339 IPR001841 -
Mepo3g05361 349 MobiDBLite consensus disorder prediction 92 193 - -
Mepo3g05361 349 Pfam Zinc finger, C3HC4 type (RING finger) 298 341 - -
Mepo3g05361 349 MobiDBLite consensus disorder prediction 58 72 - -
Mepo3g05361 349 MobiDBLite consensus disorder prediction 224 252 - -
Mepo3g05361 349 MobiDBLite consensus disorder prediction 31 72 - -
Mepo3g05361 349 SUPERFAMILY RING/U-box 300 345 - -
Mepo3g05361 349 SMART ring_2 301 338 IPR001841 -
Mepo3g05361 349 MobiDBLite consensus disorder prediction 148 192 - -
Mepo3g05361 349 MobiDBLite consensus disorder prediction 121 141 - -
Mepo3g05361 349 CDD RING-HC 300 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05361 Mepo-Chr3 67081483 67082830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05361 13 349 C3H Transcription Factor Family AT3G07120 37.097 6.33e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05361 - - gmx:100795449 420.624