Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05345 ATGCCCTTGGAAGGGATTTTCATTGAACCAATTTCAACATCAACAACTCCACCTGATCTTTCTCTTCACATAAGTCCACCAAGTACTTCTAATTCTTCTTTGATTTGCAACAACACAACTCAAACATCAAATTATGAAGCTCACAATTCTTCAAGAACTTTGGCTCAAGCTCAAGCTCACACTGAACTCTCTCTTGGAAGAAATTTTAGTGCTCAAGAACCACAACAACAACAACAACCACATAACCCTTATTATCAAAACCAACAAGCTCATTTTCCTCACTTTCAACATCACAACAATCACAACTCCACAACAACAACTAGTACTACTACAACAAATTCTTCAAGTCACATGAATCACATAAATTATGGTGTTTCATTGCTTGATGTGTCATCAACATCCTCAGAAGGGTTAAGACCAATCAAAGGGATTCCAGTTTATCACAACCGTTCATTTCCTTTTTTACCAGTCATGGAACATTCAAGAGAAAAAGATCCCAAGATGTGTTTATATCACCACATGCCTAATTCAACTCCGTCTCCTTCTTCATCGTCTTCTCCTCTTTCCCCCTACATAGCTGCAGGAGGTTTAGATCCCATGTCGTTTTTAAACTCAAGTGGCTCAACGGCGGCTTATCGAGCCGCCGTAGCCACAAGGTTTAATAACGAACCTTTCAAATCTCATCAATATCCATTGCACCACCATCATCATCATCACTCACACTATGGTAGTGTTGGACTTGGAAGCTCAGAAGCATCCATGATGAGATCAAGGTTTTTGCCTAAATTACCGACAAAAAGAAGCATGAGAGCACCAAGAATGCGATGGACAAGTACCCTCCATGCTAGATTTGTTCATGCTGTTGAGCTTCTTGGTGGCCATGAAAGAGCAACACCAAAGTCAGTTTTGGAATTGATGGATGTGAAGGATCTCACATTAGCTCATGTAAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACAACTGACAAACCTGCAGCTTCTTCAGGCCTTTCAGATGGATCTGGAGAGGATGATGTGCCACAAATTGGAAGCAATGGTGGAATACGTCAATTTTCAGATCAAAGAGGGCCAACAGATAGACCAATACAGCAAGATATGGATTACTCATCCACCAACACTCTATGGAGTAATTCTTCAAGTAGTAGAGAACCATGGCCACAAACAAGTCCAAACGACATAGATGGTTTCAGACCAACTATCTTCCAATCACAACCAATATCAGGAGGACATCAAATTCAGGAGTGTGATTCAAATCAGCACAAGAACAATTTGTCAGGATCTAATTTAGAGTGTAAGAACCCAAGCTTGGAGTTCACATTAGGAATACCAGATTGGAATGGCAAAGGACAAGCTTAA 1380 0.4036 MPLEGIFIEPISTSTTPPDLSLHISPPSTSNSSLICNNTTQTSNYEAHNSSRTLAQAQAHTELSLGRNFSAQEPQQQQQPHNPYYQNQQAHFPHFQHHNNHNSTTTTSTTTTNSSSHMNHINYGVSLLDVSSTSSEGLRPIKGIPVYHNRSFPFLPVMEHSREKDPKMCLYHHMPNSTPSPSSSSSPLSPYIAAGGLDPMSFLNSSGSTAAYRAAVATRFNNEPFKSHQYPLHHHHHHHSHYGSVGLGSSEASMMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDDVPQIGSNGGIRQFSDQRGPTDRPIQQDMDYSSTNTLWSNSSSSREPWPQTSPNDIDGFRPTIFQSQPISGGHQIQECDSNQHKNNLSGSNLECKNPSLEFTLGIPDWNGKGQA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05345 459 MobiDBLite consensus disorder prediction 1 37 - -
Mepo3g05345 459 MobiDBLite consensus disorder prediction 353 442 - -
Mepo3g05345 459 MobiDBLite consensus disorder prediction 327 459 - -
Mepo3g05345 459 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 456 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mepo3g05345 459 FunFam Myb family transcription factor 270 328 - -
Mepo3g05345 459 Gene3D - 271 328 - -
Mepo3g05345 459 MobiDBLite consensus disorder prediction 9 37 - -
Mepo3g05345 459 NCBIfam myb-like DNA-binding domain, SHAQKYF class 272 325 IPR006447 GO:0003677
Mepo3g05345 459 SUPERFAMILY Homeodomain-like 269 325 IPR009057 -
Mepo3g05345 459 MobiDBLite consensus disorder prediction 95 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05345 Mepo-Chr3 66942987 66949733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05345 1 456 G2-like Transcription Factor Family AT5G16560 42.116 7.13e-83 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo3g05345 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05345 - - ccaj:109796302 603.979