Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05340 ATGGTTCTCTCAAAGACAGCCTCCGAGTCTGATGTTTCCGTCCACTCAACCTTTGCTTCTCGCTATGTCAGAACTTCACTTCCTAGATTCAAGATGCCAGAGGAGTCTATACCAAAGGATGCAGCATACCAAATAATAAACGATGAATTGATGCTTGATGGAAACCCTAGATTGAACTTGGCATCCTTTGTGACAACATGGATGGAGCCTGAGTGTGATAAACTCATCATGGCTTCCATTAACAAGAACTACGTTGACATGGATGAATACCCAGTCACCACTGAGCTACAGAATCGGTGTGTTAACATGATAGCTCATCTGTTTAATGCACCACTTGAAGAAACTGAGGCTGCAGTTGGTGTTGGTACTGTTGGCTCATCAGAGGCTATAATGTTAGCTGGATTGGCATTCAAAAGGAAGTGGCAGAACAAAAGAAAACTAGAGGGAAAGCCTTATGACAAACCCAACATTGTCACTGGAGCCAATGTCCAGGTTTGTTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAATTGAAAGAGGTGAAGCTAAGTGAAGGATACTATGTAATGGACCCTGCAAAGGCTGTGGAATTAGTGGATGAGAACACCATTTGTGTTGCTGCTATCCTTGGTTCGACGCTAAATGGAGAGTTTGAAGATGTTAAACGCTTAAACGATCTCCTTGTTGAAAAGAATAAGGAAACTGGATGGGACACTCCTATTCATGTGGATGCAGCTAGTGGTGGCTTCATTGCTCCATTTATTTATCCAGAACTTGAGTGGGATTTCCGCTTACCATTGGTGAAGAGCATCAATGTTAGTGGTCACAAATATGGTCTTGTCTATGCTGGAATTGGTTGGGCTATTTGGAGAAGCAAGGAAGATTTGCCTGAAGAACTTATCTTTCACATCAACTATCTAGGAGCTGATCAACCTACCTTTACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTCATTGCTCAATATTACCAACTAATACGTCTTGGTTTTGAGGGGTATAAAAATGTGATGGAAAATTGCAGAGACAACATGATAGTACTAAAAGAGGGACTCGAAAAAATGGGGCGCTTCAACATTGTGTCGAAAGATGATGGTGTACCTTTGGTGGCTTTCACATTGAAGGACCACACAAACTTTGATGAATTTCAAATCTCCGACTTATTGAGGCGCTTCGGATGGATTGTTCCAGCATACAGCATGCCCCCGGATGCTCAACACATAACCGTTTTACGCGTTGTCATTAGGGAGGATTTCTCAAGGACTTTAGCAGAGCGCCTTGTAGCTGATATAGAGAAAGTGTTGCACGAGCTTGATTCACTTACTGCGAGGATAAAGATGATAAGTGGTGCAAGTAGTGTTACAGTTCATGAAGTTGTGAAAGACAATGGTCAAGTAGTGGTTGCTAAAAAGAGTGCTTTGGAGACTCAGAGAGAAATTACTGCGATTTGGAAGAAGTTTGTGATGGACAGGAAGAAGTTGAATGATAAGATGAATGGTGTTTGCTAG 1527 0.4224 MVLSKTASESDVSVHSTFASRYVRTSLPRFKMPEESIPKDAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEETEAAVGVGTVGSSEAIMLAGLAFKRKWQNKRKLEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPAKAVELVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWAIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYKNVMENCRDNMIVLKEGLEKMGRFNIVSKDDGVPLVAFTLKDHTNFDEFQISDLLRRFGWIVPAYSMPPDAQHITVLRVVIREDFSRTLAERLVADIEKVLHELDSLTARIKMISGASSVTVHEVVKDNGQVVVAKKSALETQREITAIWKKFVMDRKKLNDKMNGVC 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05340 508 Gene3D - 361 447 - -
Mepo3g05340 508 FunFam Glutamate decarboxylase 66 360 - -
Mepo3g05340 508 PANTHER GLUTAMATE DECARBOXYLASE 1 498 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mepo3g05340 508 Gene3D - 66 360 IPR015421 GO:0003824
Mepo3g05340 508 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mepo3g05340 508 FunFam Glutamate decarboxylase 361 448 - -
Mepo3g05340 508 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mepo3g05340 508 FunFam Glutamate decarboxylase 1 65 - -
Mepo3g05340 508 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Mepo3g05340 508 Gene3D - 1 65 - -
Mepo3g05340 508 Coils Coil 430 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05340 Mepo-Chr3 66825513 66831995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05340 1 508 Calmodulin-binding Proteins AT5G17330 85.069 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05340 K01580 - gmx:100796533 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05340 3 66825513 66831995 Mepo3g05340 3 66825513 66831995 ECH
Mepo3g05340 3 66825513 66831995 Mepo7g02059 7 30905194 30911630 PCT