Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05338 ATGCCGATTCATGCTATGATTGGAGCTGAGTTTATAGGGACATTGATTCTGATGTTTGCTGGGACAGCCACTACTATTGTTAACCAAAAGACACAAGGCTCGGAGACTTTGATTGGGTGTGCTACCTCTACTGGTCTTGCAGTTATGATCATCATCATCTCCACTGGCCACATCTACGGTGCTCATCTCAACTCTGCAGTCACCATTTCCTCTGCTGCATTGAAGCACTTCCCGTGGAAGCATGTAACCAAAGCTTTTCCTTAA 264 0.4545 MPIHAMIGAEFIGTLILMFAGTATTIVNQKTQGSETLIGCATSTGLAVMIIIISTGHIYGAHLNSAVTISSAALKHFPWKHVTKAFP 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05338 87 Gene3D Glycerol uptake facilitator protein. 2 85 IPR023271 -
Mepo3g05338 87 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g05338 87 PRINTS Major intrinsic protein family signature 44 68 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g05338 87 Pfam Major intrinsic protein 8 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g05338 87 PANTHER AQUAPORIN NIP2-1 6 83 IPR034294 -
Mepo3g05338 87 SUPERFAMILY Aquaporin-like 7 82 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05338 Mepo-Chr3 66794854 66795208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05338 3 82 Major Intrinsic Protein MIP AT1G80760 77.500 1.54e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05338 K09874 - qsu:112009900 137.117