Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05335 ATGGCACCTGTTTCATTGCCTCCTGGATTTAGGTTCCACCCCACCGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATTAATGGCCGTAGGATTGAGTTGGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGCTACCGGGAAAAGATTTGGAATGGTATTTTTTCAGCCCAAGAGATAGGAAGTATCCAAATGGGTCAAGAACCAATAGAGCAACAAAATCTGGATATTGGAAGGCAACTGGGAAAGATCGCAAGGTGAATGCTCAGACTCGTGCTGTTGGAATGAAGAAAACCCTAGTTTACTATAGAGGAAGAGCACCACATGGATCTCGTACCGGTTGGGTTATGCATGAGTATCGTCTTGATGAAAGAGAATGTGACAATCCTTCTGCAGGCTTGCAGGATGCATATGCTCTTTGCCGTATATTCAAGAAGAGTACAGTGATTGCTCCAAAAGTTGGGGAGCAATATGTTAACAATGTGACCAGGCATGCAAACCATATGACAAGTGATCAATCATCAAGCATTGAGTTGTACTCTGAAGGAAGAGATGAAGTTATAGGGAGCTCAAATTATTTGAAGCCATGGGACCCAAGCACATCCCAAAACATGAATGGGACTAATACTCTCAATAACAATGGTGGGAATGTCACAAGAGATGATGGAATTTGGACACAATTCTTATCAGAAGACTTGCTCAGTCTTCCAATATCTTCATCATTTCCTAATTATGGATCCACACCTAATTACCCTCCATCCAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAACATAGGTTTTCTTTGCCTCCCTTGGAGGTGGAAGACTTCCCTCAAGTTGGTATGAATTCTGAGCTGAAGATGACACAATTAGTCTCAGGTTCCACGAGTGGAACTAGAAATGAAACAGATATCTTGCAGGAAATTCTATCTGTAGCTCAAGCTTCTCAAGAATTGATAAACCAATCAAACTACTCACATGCATTTGGTGGAAATGAAAATTATGCTACTGATCATGAAAATGATTTTACTTATATGGTTGGAAATAATTACAATCATGTGACTGATCATATGAGTTCCATGAGATATATTGATGACAAAGCATGGGAAGATCCAAACACAAGATCAATTGAAATTGGGGATCTTGATAATGAATTCAAGGCTGAAAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCCAGCAATGATTTAGAGAAGAGTTTTATGGAAGAGCATCAAAAGGTTGTTCCAATTGAGAATATTTCAAGCTTCAAAACAAACAGGAAAGAGAATGAGGTGCAAGTAGAATCTGAGCAGCCAAATATCAACAAAGAAGTCAATGATGCTAACATTGATAATTTCTCAATGGGGTTTATCAATGATAATGACCCTAATGAGAATTTTATAGATGATGGTAACATTGATTATTCAAATTCTACAAGTTATGAAGTTGTTGAGGAAACAACAAAAGTTAGTCATGGAATGTTTGTTGCTACACGCCAAGTAGCAGACACATTCTTTCACCAAATAACACCTTCACAAACAATCAAAGTTCAACTCAATCCAATTCTGGAAAACAAAAAATCTATAGAGAATGCAGAGACAATGATTATACCAAAGAATCAAGGATACTCTCTCTTAAGGAAGTTTAAGGCCAATTTGATGAAGTACATGAAAAATCCATCAAAGATAATAGCAAGTGCAATTGTGTTCATATTTGCACTTTTTTTGGTGCTTTGTGTTTATTTGAAGGAGCAAGTGGAAGATATGAAACCAAAGTCAGAATATGTGAAAAGGAAATATAGCTATGGAGCTAATAGCATGAAGAAAATCATTTGGAATGAGCAAGAGAAAATTTGGTTTGTTGGTATCAAAAGTGGTAAAGGTTTTGAGGTGGTCTTGAAGAAGATAGGAATTTTCCTAACTATATCTTTGGCTCTTTGTACAATGTGGGCTAACCATATGATAGTTTGTTATTGA 2022 0.3764 MAPVSLPPGFRFHPTDEELVSYYLKRKINGRRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNAQTRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECDNPSAGLQDAYALCRIFKKSTVIAPKVGEQYVNNVTRHANHMTSDQSSSIELYSEGRDEVIGSSNYLKPWDPSTSQNMNGTNTLNNNGGNVTRDDGIWTQFLSEDLLSLPISSSFPNYGSTPNYPPSKVDIALECARMQHRFSLPPLEVEDFPQVGMNSELKMTQLVSGSTSGTRNETDILQEILSVAQASQELINQSNYSHAFGGNENYATDHENDFTYMVGNNYNHVTDHMSSMRYIDDKAWEDPNTRSIEIGDLDNEFKAERMVENLRWVGMSSNDLEKSFMEEHQKVVPIENISSFKTNRKENEVQVESEQPNINKEVNDANIDNFSMGFINDNDPNENFIDDGNIDYSNSTSYEVVEETTKVSHGMFVATRQVADTFFHQITPSQTIKVQLNPILENKKSIENAETMIIPKNQGYSLLRKFKANLMKYMKNPSKIIASAIVFIFALFLVLCVYLKEQVEDMKPKSEYVKRKYSYGANSMKKIIWNEQEKIWFVGIKSGKGFEVVLKKIGIFLTISLALCTMWANHMIVCY 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05335 673 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Mepo3g05335 673 FunFam Nac domain-containing protein 86 15 160 - -
Mepo3g05335 673 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Mepo3g05335 673 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 265 - -
Mepo3g05335 673 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Mepo3g05335 673 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05335 Mepo-Chr3 66754510 66758308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05335 1 664 NAC Transcription Factor Family AT1G65910 44.315 2.36e-165 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g05335 NAM 6.8e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05335 - - gsj:114381841 959.133