Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05332 ATGGCGAATCAAGATCAAGATGGATTAGCTTGCTCCAGTGTTAGCCCTGCAGTAGGAAATGTAGCTGGATCACATCCTGTTACTCATATTCAACTCAGCGATCAGTTATCTTGCACGAATGATTATGCTCTTAAGGCAAGGAAACCATATACTATATCAAAACAGAGAGAAAGATGGACAGATGAAGAACATAAGAAGTTCATTGAAGCCTTAAAGCTGCATGGCCGGGCCTGGCGACGCATTGAAGAACATGTCGGTTCAAAGACTGCGGTCCAGATTCGAAGTCATGCTCAGAAGTTTTTCACCAAGGTTCTTCGCGACACGAGTGCAAGCATTGCAAACACCAAGGAATCGATTGAAATTCCTCCTCCTAGACCAAAACGTAAGCCTATGCACCCTTATCCTCGCAAGCTAGTTGAGACAGCCGGTAGTAAAGAAATTTCAATCCCGAAAAAGGCAATGAACTCTAATTCTCTGAAGACATCAGATTTTGATCAAGCAAACCAATCTCCCAAATCAGTTTTATCTACACTTGGTTCCGAAAGCCTTGGTTCATCCAATTCAGATACACCAAACGGAAGTTTATCTCCGATATCATCGATTAGTTGTGTCCAAGCAAGTGTTTTCAGACCTGCTGAATTCAAAACGCTGTCAGAAGAAGAAGCTAGGCTAGATGCTGATTCAGCTCCTGATGAGAAACCTCTTCTGAAACAAGAGATTCTCTCTGATGAAAGTGTTTCTGCAAAAGAAAGCATAGCAGAAGAATCGTCTCATCAAACTCTTAAACTTTTTGGGACGACTCTATTTGTAAAAGATTTCTGCAAACCATCTTCTCCAACAATTGAGGCATGCAGACCAATAACTCATGGCATACATGTTAGAATGGGAGAAGGAAAATTGGAACTTCTTGGCAAAAGTACACTATGTGAAACATCAGCCATATATCAGTTAAGAGTAAGAGTGAGGCGCGAAACTTGTGGGAAAGGGTTTGTGCCGTATAAAAGGTGCATGTCAAAAAAAGAAAACCAGTCTTCATCTGCAACAGCTGATGAAAGATAA 1059 0.4136 MANQDQDGLACSSVSPAVGNVAGSHPVTHIQLSDQLSCTNDYALKARKPYTISKQRERWTDEEHKKFIEALKLHGRAWRRIEEHVGSKTAVQIRSHAQKFFTKVLRDTSASIANTKESIEIPPPRPKRKPMHPYPRKLVETAGSKEISIPKKAMNSNSLKTSDFDQANQSPKSVLSTLGSESLGSSNSDTPNGSLSPISSISCVQASVFRPAEFKTLSEEEARLDADSAPDEKPLLKQEILSDESVSAKESIAEESSHQTLKLFGTTLFVKDFCKPSSPTIEACRPITHGIHVRMGEGKLELLGKSTLCETSAIYQLRVRVRRETCGKGFVPYKRCMSKKENQSSSATADER 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05332 352 PANTHER SWI/SNF COMPLEX-RELATED 40 242 - -
Mepo3g05332 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Mepo3g05332 352 Gene3D - 58 104 - -
Mepo3g05332 352 NCBIfam myb-like DNA-binding domain, SHAQKYF class 54 103 IPR006447 GO:0003677
Mepo3g05332 352 ProSiteProfiles SANT domain profile. 54 105 IPR017884 -
Mepo3g05332 352 SMART sant 55 103 IPR001005 -
Mepo3g05332 352 SUPERFAMILY Homeodomain-like 50 103 IPR009057 -
Mepo3g05332 352 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Mepo3g05332 352 FunFam protein REVEILLE 6 isoform X1 58 106 - -
Mepo3g05332 352 CDD SANT 58 101 IPR001005 -
Mepo3g05332 352 Pfam Myb-like DNA-binding domain 56 99 IPR001005 -
Mepo3g05332 352 MobiDBLite consensus disorder prediction 150 195 - -
Mepo3g05332 352 MobiDBLite consensus disorder prediction 115 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05332 Mepo-Chr3 66715648 66721121 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo3g05332 Myb_DNA-binding 9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05332 - - psat:127084287 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05332 3 66715648 66721121 Mepo3g05332 3 66715648 66721121 ECH