Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05307 ATGCGTAGCATATTCTATGAAAACCTCAACGTAACACTTCTAGATTTGAGAAACCAAATTAGCAATGAAAGCAAGCACTTTGCCACATCACAACAAGACACAGGAGAAGTAATTATATATTCTATGTTTCAATGTAGAAATTATCTCTCCAAAAATGATTGTGTTGCTTGCTTCAACACTGCCTCTACCAAAATCAGTACCTGCGTTTCCATTGGGGCTAGATTTATCTACGATGGGTGTTTCCTCAGATTCGAGACTGAAATATTCTACAATCAAACAACACAACCTGGGAATGGTATGTTATGTGGAAACAAGACTGCAAAAGAAGGCACTGCATTTGGAACAATTGGACAAAAAGTGCTAATGGATATCCAATTAGCAACACCTAAAATTAAAGGGTTTTTTGCAGCTACTAAGACACAAGTGACACCTGGTGGAAATAGTTCAATTTATGCCATTGCACAGTGTGCTGGAACAGTCACTGAAAGTGGTTGTTTAGATTGTTTGACAGTTGGATACAACAACTTGCAAGCTTGTCTTCCTAACACAGATGGTAGAGCATATGATGCAGGGTGCTTTATGAGATACTCAGAGACACCCTTTTTTGCTAACAATCAGACCATTGATATCACAGCCTACTTAAATCCAGAAACACTTATAGGTGGTGGTGTTGGAGGTTCAAGCAGCAAATGGACCATTATATGTGGTGTTGTTGGAGGTGTAGTAGGTCTTGTTTTGATCATTCTTGCGATTTTAGCTTGGCAACAATACACAAAACCCAAGAGGACACCTAAAGGCAACATATTGGGAGCAACTGAGTTTAAAAGTCCAGTTAACTACAAGTATAATGATTTGAAAGCTGCAACAAGAAACTTCAATGATGAAAATAAACTTGGAGAAGGGGGCTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAAATGTTGTAGCAGTTAAGAAACTAGTTTTGGGAAAATCAAGCAAGATAGACAATGATTTTGAAAGTGAAGTAAAGCTTATAAGCAATGTTCATCACAGGAATCTTGTTAGACTTCTTGGTTGTTGCAGTAAAAACCAAGAGAGAATACTTGTCTATGAATACATGGCAAACAGCAGCTTAGACAAATTCTTGTTTGGTAACAAACAAGGTTCCCTAAATTGGAAACAAAGGTGTGATATAATTTTAGGCACGGCAAGAGGGCTGGCCTGTCTTCATGAGGAATTCCACATTTCCATTATACATAGAGATATAAAGACTAGCAATATACTCCTTGATGATAATCTTCACCCCAAAATTGCTGATTTTGGATTGGCGCGGCTTTTACCAGGGGATCGTTCTCATCTAAGCACTGGAGTTGCAGGAACATTGGGATATACAGCACCTGAGTATGCAATCCATGGTCAATTATCAGAAAAGGCTGATACTTACAGCTATGGTATTGTAGTCCTAGAAATCATAAGTGGTCGAAAGAGTACGGAAGTAAAGGAAGACGATGATGATGGTGAATACCTTCTTAAAAAATCATGGAAACTTCATGAGAGAGGCATGCACTTGGGGCTCTTGGACAAGGCCTTAGACCCTAATGACTATGATGGAGATGAAGTAAAGAAAATGATAGAGATTGCTTTATTATGTACTCAAGCATCAGCTGTAATGAGACCAACAATGTCTGAAGTTGTAGTCCTCCTTCAAACCAGAAGCTTAGCGGAGCACCTGCAACCAACTATGCCTGTGTTTGTAGAAACAAATCTCAGGTCTCGTGAAGGCCACTCTACCTCAACTGGTTCTTCTACATCTAATGCTACTGCCTCCGTTTCTGTTCTATCAGCTCGATGA 1839 0.3921 MRSIFYENLNVTLLDLRNQISNESKHFATSQQDTGEVIIYSMFQCRNYLSKNDCVACFNTASTKISTCVSIGARFIYDGCFLRFETEIFYNQTTQPGNGMLCGNKTAKEGTAFGTIGQKVLMDIQLATPKIKGFFAATKTQVTPGGNSSIYAIAQCAGTVTESGCLDCLTVGYNNLQACLPNTDGRAYDAGCFMRYSETPFFANNQTIDITAYLNPETLIGGGVGGSSSKWTIICGVVGGVVGLVLIILAILAWQQYTKPKRTPKGNILGATEFKSPVNYKYNDLKAATRNFNDENKLGEGGFGDVYKGTLKNGNVVAVKKLVLGKSSKIDNDFESEVKLISNVHHRNLVRLLGCCSKNQERILVYEYMANSSLDKFLFGNKQGSLNWKQRCDIILGTARGLACLHEEFHISIIHRDIKTSNILLDDNLHPKIADFGLARLLPGDRSHLSTGVAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGRKSTEVKEDDDDGEYLLKKSWKLHERGMHLGLLDKALDPNDYDGDEVKKMIEIALLCTQASAVMRPTMSEVVVLLQTRSLAEHLQPTMPVFVETNLRSREGHSTSTGSSTSNATASVSVLSAR 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05307 612 ProSiteProfiles Gnk2-homologous domain profile. 95 201 IPR002902 -
Mepo3g05307 612 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 40 600 - -
Mepo3g05307 612 CDD STKc_IRAK 298 565 - -
Mepo3g05307 612 Gene3D - 1 89 IPR038408 -
Mepo3g05307 612 Gene3D - 98 201 IPR038408 -
Mepo3g05307 612 Pfam Protein kinase domain 292 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05307 612 FunFam Cysteine-rich receptor-like protein kinase 2 259 368 - -
Mepo3g05307 612 Gene3D Transferase(Phosphotransferase) domain 1 369 576 - -
Mepo3g05307 612 Pfam Salt stress response/antifungal 3 86 IPR002902 -
Mepo3g05307 612 Pfam Salt stress response/antifungal 106 198 IPR002902 -
Mepo3g05307 612 ProSiteProfiles Protein kinase domain profile. 292 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05307 612 SMART serkin_6 292 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05307 612 MobiDBLite consensus disorder prediction 587 612 - -
Mepo3g05307 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Mepo3g05307 612 FunFam Cysteine-rich receptor-like protein kinase 2 97 201 - -
Mepo3g05307 612 ProSitePatterns Protein kinases ATP-binding region signature. 298 321 IPR017441 GO:0005524
Mepo3g05307 612 Gene3D Phosphorylase Kinase; domain 1 256 368 - -
Mepo3g05307 612 ProSiteProfiles Gnk2-homologous domain profile. 1 89 IPR002902 -
Mepo3g05307 612 SUPERFAMILY Protein kinase-like (PK-like) 276 583 IPR011009 -
Mepo3g05307 612 FunFam Cysteine-rich receptor-like protein kinase 2 369 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05307 Mepo-Chr3 66439559 66442858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05307 5 612 Receptor kinase-like Gene Family AT1G70520 36.232 7.12e-120 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo3g05307 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05307 - - gmx:100801131 825.854