Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05306 ATGAGATATTCAGAGACACCTTTTTTTGCTGATAATCAAACCATTAATATCACACCCTATTTAAATCAAGAAACTTCAAGCAACATACAACGAAGCAACAAATGGGCCATTATAGGTGGTGTTGTTGGAGGTGTCGGTCTTGTTGTGATCATTCTTGCAATTTTAGGTCGGCGACAATACACAAAACCTAAGAGGGCTCCTAGAGGCAACATATTGGGAGCAACTGAGTTTAAAGGTCCAGTAAACTACAAGTATAGTGATTTAAAAGCTGCAACAAAAAACTTCAATGATGAAAATAAACTTGGAGAAGGAGGCTTTGGTGATGTATACAAGGGTACTCTAAAAAATGGAAATGTCATAGCAGTAAAAAAACTAGTTTTGGGAAAATCAAGCAAGAAGGACGATGATTTTGAAAGTGAAGTAAAGCTTATAAGCAATGTTCATCATAGAAATCTTGTTAAACTTCTTGGTTGTTGCAGTACAAAACAAGAGAGAATTCTTGTTTATGAATACATGGCAAACAGCAGCCTAGACAAATTCTTGTTTGGTAACAAAAAAGGTTCCCTCAATTGGAAACAAAGGTGTGATATAATTTTAGGCACAGCAAGAGGATTGGCCTGTCTTCATGAGGAATTCCACATTTCCATTATACATAGAGATATAAAGACTAGCAATATACTCCTTGATGATAATCTTCACCCCAAAATTGCTGATTTTGGATTGGCGCGTCTTTTACCTGGGGATCGTTCTCATCTAAGCACTGGAGTTGCAGGAACATTGGGATATACAGCACCTGAGTATGCAATCTGTGGTCAATTATCAGAAAAGGCTGATACCTACAGCTATGGAATTGTAGTCCTGGAAATCATAAGTGGTCAAAAGAGTACCGAAGTAAAGGAAGATGATGATGGTGAATACCTTCTTAAAAAATCATGGAAACTTTATGAGAGAGGCATGCATGTGGAGCTCGTGGACAAGGTCTTAGACCCTCATGACTATGATGGAGAAGAAGTAAAGAAAATGATAGAAATTGCTTTATTATGTACTCAAGCATCAGCTGGAATGAGACCAACTATGTCTGAAGTTGTAGTCCTCCTTCAAACCAGAAGCTTAGTGGAGCACCTGCAACCAACTATGCCTGTGTTTGTAGAAACGATTCTTAGGTCTCGTGAAGGCCACTCTACCACAACTGGTTCTTCTACATCTAATGCTACTGCCTCCTTTTCTATTCTATCAGCTCGATAA 1245 0.3831 MRYSETPFFADNQTINITPYLNQETSSNIQRSNKWAIIGGVVGGVGLVVIILAILGRRQYTKPKRAPRGNILGATEFKGPVNYKYSDLKAATKNFNDENKLGEGGFGDVYKGTLKNGNVIAVKKLVLGKSSKKDDDFESEVKLISNVHHRNLVKLLGCCSTKQERILVYEYMANSSLDKFLFGNKKGSLNWKQRCDIILGTARGLACLHEEFHISIIHRDIKTSNILLDDNLHPKIADFGLARLLPGDRSHLSTGVAGTLGYTAPEYAICGQLSEKADTYSYGIVVLEIISGQKSTEVKEDDDGEYLLKKSWKLYERGMHVELVDKVLDPHDYDGEEVKKMIEIALLCTQASAGMRPTMSEVVVLLQTRSLVEHLQPTMPVFVETILRSREGHSTTTGSSTSNATASFSILSAR 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05306 414 CDD STKc_IRAK 101 367 - -
Mepo3g05306 414 Pfam Protein kinase domain 95 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05306 414 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Mepo3g05306 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Mepo3g05306 414 MobiDBLite consensus disorder prediction 392 414 - -
Mepo3g05306 414 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 26 399 - -
Mepo3g05306 414 Gene3D Phosphorylase Kinase; domain 1 64 171 - -
Mepo3g05306 414 FunFam Cysteine-rich receptor-like protein kinase 2 61 171 - -
Mepo3g05306 414 SMART serkin_6 95 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05306 414 ProSiteProfiles Protein kinase domain profile. 95 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05306 414 SUPERFAMILY Protein kinase-like (PK-like) 79 385 IPR011009 -
Mepo3g05306 414 Gene3D Transferase(Phosphotransferase) domain 1 172 377 - -
Mepo3g05306 414 FunFam Cysteine-rich receptor-like protein kinase 2 172 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05306 Mepo-Chr3 66432902 66435942 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05306 10 366 Receptor kinase-like Gene Family AT1G56120 48.077 2.43e-100 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo3g05306 Pkinase 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05306 - - gmx:100305452 598.971