Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05304 ATGCGCACTGTCCAAGCGTTATTCCTCATGGGAATCGAACTTGGTGTTTCCCGGTTCCATTTCTTATTTGACTTTGACATTGGACACTTGGAAAACGTGACAAGGTACGAGAGTGAAAGATTCTACGATCAAACAACTCAACAAGGGAATGGTATAATATGTGGGAACAAAACTGCAAAAGAAGGCACGGCATTTGGAACAATTGGACATAAAGTGCTGATGGATATCCAATTAGCAACACCTAAAATTAAAGGTTTTTTTGCAGCTACCAAGACACAAGTGACACCTGGTGGTAACAGTTCAGTTTATGCCATTGCACAGTGTGCTGAAACAGTCACTGAAAGTGGCTGTTTAGCTTGTTTGACAGTTGGATACAACAACTTGCAAACTTGTCTTCCTAACACTGATGGTAGAGCATATGATGCAGGGTGTTTTATGAGATATTCAGAGACACCCTTTTTTGCTGATAATCAGACCATTGATATCACAGGCTACTTAAAAGGTGGTTCAAGCAACAAATGGGCCATTATAGGTGGTGCTGTTGGAGGTGTAGGTCTTATTGTTATCATTCTTGCATTGTTAGGTTGGCGACAATACAGAAAACCTAAGAGGGCTCCTAGAGGCAACATATTGGGAGCAACTGACTTGAAAGGTCCAGTTAACTACAAGTATAGTGATTTAAAAGCTGCAACAAAAAACTTCAATGATGAAAATAAACTTGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAAATGTTGTAGCAGTCAAGAAACTAGTTTTGGGAAAATCAAGCAAAATAGACAATGATTTTGAAAGTGAAGTAAAGCTTATAAGCAATGTTCATCACAGGAATCTTGTTAGACTTCTTGGTTGTTGCAGTAAAAACCAAGAGAGAATACTTGTCTATGAATACATGGCAAACAGCAGCCTAGACAAGTTCTTGTTTGGTAACAAACAAGGTTCCCTCAATTGGAAACAAAGGTGTAACATAATTTTAGGCACAGCAAGGGGACTGGCCTATCTACATGAGGAATTCCACATTTCGATCATACATAGAGATATAAAGAGTAGCAATATCCTCCTTGATGATAATCTTCACCCAAAAATTGCTGATTTTGGATTGGCGCGGCTTTTACCAGGGGATCGATCTCATCTAAGCACAGGAGTTGCAGGAACATTGGGATACACAGCACCCGAGTATGCAATCCATGGTCAATTATCAGAAAAGGCTGATACCTACAGCTACGGAATTGTAGTCCTGGAAATCATAAGTGGTCAGAAGAGTACAGAAATTAAGGTTGATGATGATGGTGAATTCCTTCTTCAGAAGACGTGGAAACTGCATGAGAAAGGCATGCACTTGGAGCTCGTGGACAAGGTCTTAGACCCTAATGACTACGATGGAGAAGAAGTGAAGAAAATGATAGAGATTGCTTTGTTGTGTACTCAAGCATCAGCTGGAATGAGACCAACGATGTCTGAAGTAGTAGTCCTCCTCCAAACCAGGAGCTTAGTGGAGCACCTGCAACCAACTATGCCTGTGTTTGTAGAAACGAATCTTAGGTCTCGTGAAGGCCACTCTACCTCAACTGGTTCTTCTACGTCTAATGCCACTGCCTCCTTTTCTCTATCAGCTCGATGA 1659 0.4093 MRTVQALFLMGIELGVSRFHFLFDFDIGHLENVTRYESERFYDQTTQQGNGIICGNKTAKEGTAFGTIGHKVLMDIQLATPKIKGFFAATKTQVTPGGNSSVYAIAQCAETVTESGCLACLTVGYNNLQTCLPNTDGRAYDAGCFMRYSETPFFADNQTIDITGYLKGGSSNKWAIIGGAVGGVGLIVIILALLGWRQYRKPKRAPRGNILGATDLKGPVNYKYSDLKAATKNFNDENKLGEGGFGDVYKGTLKNGNVVAVKKLVLGKSSKIDNDFESEVKLISNVHHRNLVRLLGCCSKNQERILVYEYMANSSLDKFLFGNKQGSLNWKQRCNIILGTARGLAYLHEEFHISIIHRDIKSSNILLDDNLHPKIADFGLARLLPGDRSHLSTGVAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTEIKVDDDGEFLLQKTWKLHEKGMHLELVDKVLDPNDYDGEEVKKMIEIALLCTQASAGMRPTMSEVVVLLQTRSLVEHLQPTMPVFVETNLRSREGHSTSTGSSTSNATASFSLSAR 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05304 552 SMART serkin_6 234 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05304 552 Gene3D - 50 153 IPR038408 -
Mepo3g05304 552 Gene3D Phosphorylase Kinase; domain 1 207 310 - -
Mepo3g05304 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Mepo3g05304 552 Gene3D Transferase(Phosphotransferase) domain 1 311 516 - -
Mepo3g05304 552 ProSiteProfiles Protein kinase domain profile. 234 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05304 552 Pfam Protein tyrosine and serine/threonine kinase 237 503 IPR001245 GO:0004672|GO:0006468
Mepo3g05304 552 ProSiteProfiles Gnk2-homologous domain profile. 47 153 IPR002902 -
Mepo3g05304 552 MobiDBLite consensus disorder prediction 528 552 - -
Mepo3g05304 552 FunFam Cysteine-rich receptor-like protein kinase 2 200 310 - -
Mepo3g05304 552 Pfam Salt stress response/antifungal 58 150 IPR002902 -
Mepo3g05304 552 SUPERFAMILY Protein kinase-like (PK-like) 222 530 IPR011009 -
Mepo3g05304 552 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 36 540 - -
Mepo3g05304 552 ProSitePatterns Protein kinases ATP-binding region signature. 240 263 IPR017441 GO:0005524
Mepo3g05304 552 FunFam Cysteine-rich receptor-like protein kinase 2 49 153 - -
Mepo3g05304 552 CDD STKc_IRAK 240 506 - -
Mepo3g05304 552 FunFam Cysteine-rich receptor-like protein kinase 2 311 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05304 Mepo-Chr3 66421388 66426108 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05304 35 548 Receptor kinase-like Gene Family AT1G70520 38.185 1.26e-110 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo3g05304 PK_Tyr_Ser-Thr 8.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05304 - - gmx:100305452 749.199