Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05303 ATGCGACCACAACACATCATCCTTACCTTAACAATCACCTTGTTGTGTTCATGGAGCTTAACAAAAGCTGATCCTCAAACACATTTAATCAACAAAGGTTGTAGCCAATACAACGCAACAAACTTGACCAATTTCTACCAAAATCTAAACGCAACTTTGTTAGACATAAAATCACAAGTAGGAAATAATAGCAAGCATTTTGCCACAGCACAATCAGCTAGAGGAGCAAATCCTGTTTATGCTTTGTTTCAGTGTAGGAATTATCTCTCTAATTCTGATTGTGCTACCTGCCTCGCCGTCGCCGACGCACAAATTCGGAATTGCTCCGCTGGTTCCAACGGTGCCCGTGTTATTTATGATGGTTGCTTCCTTAGGTATGAGAGCAATGGATTCTTCGACCAAACAACTCAACCTGGAAACAGTATGATATGTGGAAGCCAGGCAGCAAATGGAGCCACTGCTTTTAATGCAGCTGCACAACAAGTGCTAGAGAATCTACAAACTGCAACACCCAAAATTCTTGGTTTCTTTGCAGCTACCAAGACACAAGTTGTTGGAACTGGAAATGCAATCTATGCTATAGCACAATGTGCTGAAACAGTCACTCAAAGTGGTTGTTTAGATTGCTTGACAGTTGGATTTACCAACATACAGAGCTGTTTTCCTAATACTGATGGTAGGGCATTTGATGCTGGTTGTTTTATGAGATACTCAGAGAAATCCTTCTTTGCTGATAACCAGACCATTGATATCACACCCTTCTTAAAACAAGGAGGCTCAAGTAAGAAAGGGGCCATTATTGGTGGTGTTGTTGGAGGTGTGGCCCTTGTTGTGATCCTCCTTGCACTTTTTGCTTGGTTTAGGCTCAAAAAGAAACCCAAGAGACTTCCTAGAGGTGACATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTACTTACAGGTATAAAGATTTGAAGTCTGCAACAAAAAATTTTAACGATGAAAATAAACTAGGAGAAGGAGGTTTCGGAGATGTATACAAGGGCACTCTAAAAAATGGTAAAGTAGTTGCTGTCAAGAAATTGATTCTAGGCAACTCCGGAAAAATGGATGAACAATTTGAAAGTGAAGTGAAGCTCATAAGTAATGTTCATCACAGGAATCTAGTTCGGCTTCTCGGATGTTGCAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGGCAAACAGCAGCCTTGACAGATTCTTATTTGGTGAAAATAAGGGTTCCCTCAATTGGATTCAAAGGTATGATATAATTTTAGGCACAGCAAGAGGTCTATCCTATCTGCATGAAGATTTCCATGTTTGCATCATACATAGGGATATAAAGACTAGCAATATCCTCTTAGATGATGATCTTCAGCCTAGAATTGCTGATTTTGGATTGGCAAGACTTCTACCAGAAGATCAATCTCATGTTAGCACAAAATTTGCAGGAACATTGGGATACACTGCACCAGAATACGCAATCCATGGTCAGTTATCAGTGAAGGCTGATACCTACAGTTTTGGTGTTGTAGTCCTAGAAATCATAAGTGGCCAAAAGAGTAGTGAGTTGAGGGATGATGTTGATGGTGAATTCCTCCTTCAAAGGGCATGGAAACTATACGAGGAAGGTAGACACTTGGAGTTAGTTGACAAGACATTGAACCCTAATGACTATGATGCAGAAGAAGTGAAGAAAGTTATCGAGATTGCTTTGCTTTGCACTCAAGCAACAGCTGCTACAAGGCCAACTATGTCAGAAATAGTAGTTCTACTCAAAAGCAAGAACTTCATGGAGCATATGAAACCAACCATGCCTGTATTTGTTAACTCTAACTTGAGGCCTCGGACCGATACCTCTACCTCTACTGCTTCCTCTACATCTAATGCTACTGCTGCCACTTCTATACTATCAGCTAGGTGA 1935 0.4067 MRPQHIILTLTITLLCSWSLTKADPQTHLINKGCSQYNATNLTNFYQNLNATLLDIKSQVGNNSKHFATAQSARGANPVYALFQCRNYLSNSDCATCLAVADAQIRNCSAGSNGARVIYDGCFLRYESNGFFDQTTQPGNSMICGSQAANGATAFNAAAQQVLENLQTATPKILGFFAATKTQVVGTGNAIYAIAQCAETVTQSGCLDCLTVGFTNIQSCFPNTDGRAFDAGCFMRYSEKSFFADNQTIDITPFLKQGGSSKKGAIIGGVVGGVALVVILLALFAWFRLKKKPKRLPRGDILGATELKGPVTYRYKDLKSATKNFNDENKLGEGGFGDVYKGTLKNGKVVAVKKLILGNSGKMDEQFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDRFLFGENKGSLNWIQRYDIILGTARGLSYLHEDFHVCIIHRDIKTSNILLDDDLQPRIADFGLARLLPEDQSHVSTKFAGTLGYTAPEYAIHGQLSVKADTYSFGVVVLEIISGQKSSELRDDVDGEFLLQRAWKLYEEGRHLELVDKTLNPNDYDAEEVKKVIEIALLCTQATAATRPTMSEIVVLLKSKNFMEHMKPTMPVFVNSNLRPRTDTSTSTASSTSNATAATSILSAR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05303 644 ProSitePatterns Protein kinases ATP-binding region signature. 331 354 IPR017441 GO:0005524
Mepo3g05303 644 FunFam Cysteine-rich receptor-like protein kinase 2 290 401 - -
Mepo3g05303 644 MobiDBLite consensus disorder prediction 613 644 - -
Mepo3g05303 644 ProSiteProfiles Gnk2-homologous domain profile. 27 131 IPR002902 -
Mepo3g05303 644 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 80 632 - -
Mepo3g05303 644 ProSiteProfiles Gnk2-homologous domain profile. 137 242 IPR002902 -
Mepo3g05303 644 CDD STKc_IRAK 331 597 - -
Mepo3g05303 644 FunFam Cysteine-rich receptor-like protein kinase 2 139 242 - -
Mepo3g05303 644 ProSiteProfiles Protein kinase domain profile. 325 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05303 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Mepo3g05303 644 Pfam Protein tyrosine and serine/threonine kinase 328 595 IPR001245 GO:0004672|GO:0006468
Mepo3g05303 644 Gene3D - 140 242 IPR038408 -
Mepo3g05303 644 Gene3D - 26 131 IPR038408 -
Mepo3g05303 644 FunFam Cysteine-rich receptor-like protein kinase 2 26 131 - -
Mepo3g05303 644 Pfam Salt stress response/antifungal 148 239 IPR002902 -
Mepo3g05303 644 Pfam Salt stress response/antifungal 34 128 IPR002902 -
Mepo3g05303 644 MobiDBLite consensus disorder prediction 614 644 - -
Mepo3g05303 644 SUPERFAMILY Protein kinase-like (PK-like) 309 625 IPR011009 -
Mepo3g05303 644 Gene3D Phosphorylase Kinase; domain 1 300 401 - -
Mepo3g05303 644 SMART serkin_6 325 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05303 644 Gene3D Transferase(Phosphotransferase) domain 1 402 611 - -
Mepo3g05303 644 FunFam Cysteine-rich receptor-like protein kinase 2 402 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05303 Mepo-Chr3 66404236 66410292 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05303 3 644 Receptor kinase-like Gene Family AT1G70520 36.544 1.08e-130 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo3g05303 PK_Tyr_Ser-Thr 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05303 - - gmx:100813585 992.26