Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05254 ATGTCGAAGTTTGCTGGAAAAGACGCGTTTCATTTGCGCGTGAGGGTTCATCCTTTCCACGTGTTGAGGATTAATAAGATGTTATCGTGTGCTGGGGCGGATAGGTTGCAGACGGGGATGAGAGGTGCGTTTGGGAAACCGTTAGGGACTTGTGCTAGGGTTAGTATTGGTCAGGTGCTGTTGTCTGTTAGGTGTAAGAGTGTGAATGGTGATCATGCTCAAGAGGCTCTTCGTCGTGCTAAGTTTAAGTTCCCTGGGCGTCAGAAGATTATTGTTAGTAGAAAGTGGGGATTTACAAAGTTGAGTCATGCTGAATACTTAAAGTTGAAATCTGAGAACAGAATTGTGCAGGATGGGGTAAATGCAAAGGTTCTTGGCTGCCATGGACCTTTGGCTAATCGTCAGCCTGGAAGAGCTTTCTTGCCTGCTTAG 432 0.463 MSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTCARVSIGQVLLSVRCKSVNGDHAQEALRRAKFKFPGRQKIIVSRKWGFTKLSHAEYLKLKSENRIVQDGVNAKVLGCHGPLANRQPGRAFLPA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05254 143 SUPERFAMILY Ribosomal protein L16p/L10e 1 100 IPR036920 GO:0003735|GO:0005840|GO:0006412
Mepo3g05254 143 ProSitePatterns Ribosomal protein L10e signature. 33 54 IPR018255 GO:0003735|GO:0005840|GO:0006412
Mepo3g05254 143 Gene3D - 105 139 - -
Mepo3g05254 143 Pfam Ribosomal protein L16p/L10e 3 91 IPR016180 GO:0003735|GO:0005840|GO:0006412
Mepo3g05254 143 CDD Ribosomal_L16_L10e 1 91 IPR016180 GO:0003735|GO:0005840|GO:0006412
Mepo3g05254 143 Gene3D Ribosomal protein L10e/L16 1 104 IPR036920 GO:0003735|GO:0005840|GO:0006412
Mepo3g05254 143 PANTHER 60S RIBOSOMAL PROTEIN L10 1 138 IPR001197 GO:0003735|GO:0005840|GO:0006412
Mepo3g05254 143 FunFam 60S ribosomal protein L10, putative 100 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05254 Mepo-Chr3 65847186 65848402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05254 1 143 Cytoplasmic Ribosomal Protein Gene Family AT1G26910 84.615 9.54e-87 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05254 K02866 - gmx:100779884 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05254 3 65847186 65848402 Mepo3g05254 3 65847186 65848402 ECH