Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05253 ATGGTGATTTCAAGGATGTATCTTTCAAAGGGTCACAAGCATGAAGTTGTTTTCATTTTATGGTTTTGTTGCTATGTGTTATTTGTTGCTGCACAAGATAATATCACTAACCCTACTGAAGTTGAAGCATTAAAAGCCATAAAAGAAAGGTTGATTGATCCTAATCGAAATTTGAGCAATTGGAATCGCGGAGACCCATGTACATCTCACTGGACAGGAGTTTTGTGTTTCAATGAAACATTAGTGGATGGCTACTTACATGTTCAAGAATTGCAACTAATGAATTTGAGCTTGTCTGGAAATTTAGCACCAGAAATCGGCAACTTGGTTTATATGGAAAGATTGAACTTCATGTGGAACAAAATAACTGGGAGTATTCCAAAGGAAATTGGCAATATCAAATCGTTATTCCTCTTGCTCCTGAATGGAAATAAATTAACAGGTTCGCTGCCAGAGGAGATTGGATTTCTTCCAAAGCTTGACAGAATACAAATTGATCAGAACAATATATCAGGACCTCTACCTAAATCATTTGCAAACCTTAAGAAAACAAAGCATTTTCACATGAACAATAATTCAATTAGCGGGCAAATCCCACCGGAACTTGCGCGATTACCATCACTTGTTCATTTCCTTCTTGATAACAACAATTTATCAGGATATCTTCCTCCTCAGCTATCACAACTACCAAACTTACTTATACTCCAACTTGACAACAATAACTTTGAAGGAAATAGCATTCCAGATACTTATAGTAACATGTCAAAACTGTTGAAGTTGAGCCTTAAGAACTGTAACTTACAAGGACCGATTCCTGACTTAAGCCGGATACCACACCTTCTTTATCTTGACCTCAGTTCGAATCAGTTGAATGAATCACTTCCTTCCAAACTTGCAGAAAACATCACAACAATTGATTTATCAAACAACAGGCTTACTGGAAACATCCCGTCCTCGTTTTCTAGTCTTTCAAAACTTCAGAGATTGTTTCTTGCAAACAATTCATTGAGTGGCAGTGTTCCTTCCACAATTTGGAACAAGAATTTAAATGGATCAGAAAGATTTATCTTGGAGTTGGAAAATAATCAATTCACAACTGTATCAGGCAGTACTGATCTACCTTCAAATGTCACAGTCTTGCTTCATGGGAATCCTCTATGCTCAAATAACTCCTTGAGTCAGCTATGTAGTTCTCAAGGTGTTAACAACACAGATGACCTCGTTCCAACAAACGCCAACGGCTTCTGTCAATCATGTCCGCCACCTTATGAACTCTCTTTGGATTGTTTCTGTGCAGCCCCGTTGCATGTTGGTTATCGATTGAAAAGTCCCGGGTTTTCAGATTTCCTTCCTTACAAAAATGAATTTGAGAAATACCTGACTACTGGTCTTAGTATAAACATCAGTCAGCTAAACTTTACTTTTCAGTGGGTAGCAGGACCTCGGTTAAGAATGAACTTGACGTTTTTCCCTCTATATGTTAATCAATCTAGTCCTCATAATTTCACTGAAACTGAGGTCCAACGAATTAGAAGCATGTTCACAGGATGGAATATTCCCGACAGTGATTTGTTTGGACCTTATGAATTGATCAACTTCGATATGGGTTTTTACCAGAAGGCGACTTCCACCTCTTCAAAATCACAGATAAGTACGGGTGCAATAGTTGGCATAGTCTTAGGGGCAATTGCATGTGCAGTGACGCTATCTGCTATTGTTACTCTTCTTATATTAAGAACAAAATTGAAAGATTATCATGCAGTTTCCAAACGGCGTCATGTGTCTAAAATCAAAATAAAAATGGATGGGGTAAGGTCCTTCACTTATGAAGAATTGTCCTCCGCTACGAACAACTTTAGCAGCTCCGCTCAAGTCGGACAAGGGGGCTATGGGAAGGTATATAAAGGTGTCATTTCCAATGGGACAGCTGTTGCCATAAAGCGTGCACAGGAGGGGTCACTGCAAGGCGAGAAGGAGTTCCTTACTGAAATATCGTTACTATCAAGGTTACATCATCGCAACCTTGTGTCTCTGGTTGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAATATATGCCAAACGGAACACTAAGAGATCACCTTTCTGTTTCAGCAAAAGAACCTCTGACTTTTATCATGAGATTGAAGATTGCATTAGGGTCGGCTAAAGGTCTCATGTATCTACACAATGAAGCCGATCCTCCAATATTTCACCGTGATGTCAAGGCCAGCAACATATTATTGGATTCTAAGCTCTCTGCAAAAGTCGCAGATTTCGGACTTTCACGGCTTGCCCCAGTTCCAGATATGGAAGGAATTGTGCCTGGTCATGTATCTACTGTGGTAAAGGGTACACCGGGTTACCTTGACCCAGAGTACTTCTTAACTCACAAACTGACCGACAAGAGTGATGTTTATAGTCTCGGCGTTGTGTTTCTGGAAATTTTGACTGGGATGCATCCTATCTCACATGGCAAAAATATTGTTAGAGAGGTCAATCTTTCATACCAATCTGGCGTAATATTTTCAATCATCGATGAACGAATGGGATCTTATCCATCGGAGCACGTGGAGAAATTTTTGACATTGGCTCTCAAGTGTGTTAACGACGAGCCAGATGATCGGCCTACAATGGCAGAGGTCGTTAGAGAGCTTGAAAACATATGGAACGTAATGCCGGAATCAGATACAAGAAGAGCTGAGTCTATAACTAGTGGCAGTGTCAGTGATTCTAGTAAAGCAATGAGTACACCATCTTCATCCTCAGCTATAAGGACTGCTTTTGTATCAGGTGATGTGTCTGGTAGTGACCTTGTTAGTGGAGTAATACCAAGCATCAAGCCAAGATAG 2859 0.3994 MVISRMYLSKGHKHEVVFILWFCCYVLFVAAQDNITNPTEVEALKAIKERLIDPNRNLSNWNRGDPCTSHWTGVLCFNETLVDGYLHVQELQLMNLSLSGNLAPEIGNLVYMERLNFMWNKITGSIPKEIGNIKSLFLLLLNGNKLTGSLPEEIGFLPKLDRIQIDQNNISGPLPKSFANLKKTKHFHMNNNSISGQIPPELARLPSLVHFLLDNNNLSGYLPPQLSQLPNLLILQLDNNNFEGNSIPDTYSNMSKLLKLSLKNCNLQGPIPDLSRIPHLLYLDLSSNQLNESLPSKLAENITTIDLSNNRLTGNIPSSFSSLSKLQRLFLANNSLSGSVPSTIWNKNLNGSERFILELENNQFTTVSGSTDLPSNVTVLLHGNPLCSNNSLSQLCSSQGVNNTDDLVPTNANGFCQSCPPPYELSLDCFCAAPLHVGYRLKSPGFSDFLPYKNEFEKYLTTGLSINISQLNFTFQWVAGPRLRMNLTFFPLYVNQSSPHNFTETEVQRIRSMFTGWNIPDSDLFGPYELINFDMGFYQKATSTSSKSQISTGAIVGIVLGAIACAVTLSAIVTLLILRTKLKDYHAVSKRRHVSKIKIKMDGVRSFTYEELSSATNNFSSSAQVGQGGYGKVYKGVISNGTAVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLVGYCDEEGEQMLVYEYMPNGTLRDHLSVSAKEPLTFIMRLKIALGSAKGLMYLHNEADPPIFHRDVKASNILLDSKLSAKVADFGLSRLAPVPDMEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLEILTGMHPISHGKNIVREVNLSYQSGVIFSIIDERMGSYPSEHVEKFLTLALKCVNDEPDDRPTMAEVVRELENIWNVMPESDTRRAESITSGSVSDSSKAMSTPSSSSAIRTAFVSGDVSGSDLVSGVIPSIKPR 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05253 952 FunFam Leucine-rich repeat receptor protein kinase EMS1 247 343 - -
Mepo3g05253 952 Pfam Leucine rich repeat 301 345 IPR001611 GO:0005515
Mepo3g05253 952 Pfam Leucine rich repeat 158 218 IPR001611 GO:0005515
Mepo3g05253 952 MobiDBLite consensus disorder prediction 899 924 - -
Mepo3g05253 952 SUPERFAMILY L domain-like 51 404 - -
Mepo3g05253 952 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 38 199 - -
Mepo3g05253 952 Gene3D Phosphorylase Kinase; domain 1 589 694 - -
Mepo3g05253 952 CDD STKc_IRAK 625 891 - -
Mepo3g05253 952 SMART LRR_typ_2 323 347 IPR003591 -
Mepo3g05253 952 SMART LRR_typ_2 205 229 IPR003591 -
Mepo3g05253 952 SMART LRR_typ_2 277 301 IPR003591 -
Mepo3g05253 952 Gene3D Ribonuclease Inhibitor 35 295 IPR032675 -
Mepo3g05253 952 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 695 905 - -
Mepo3g05253 952 SMART serkin_6 619 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05253 952 ProSiteProfiles Protein kinase domain profile. 619 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05253 952 Gene3D Transferase(Phosphotransferase) domain 1 695 912 - -
Mepo3g05253 952 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Mepo3g05253 952 FunFam Leucine-rich repeat protein kinase family protein 583 694 - -
Mepo3g05253 952 Pfam Protein kinase domain 621 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05253 952 PANTHER RECEPTOR-LIKE PROTEIN 55 46 891 - -
Mepo3g05253 952 MobiDBLite consensus disorder prediction 900 924 - -
Mepo3g05253 952 ProSitePatterns Protein kinases ATP-binding region signature. 625 647 IPR017441 GO:0005524
Mepo3g05253 952 SUPERFAMILY Protein kinase-like (PK-like) 604 908 IPR011009 -
Mepo3g05253 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
Mepo3g05253 952 Gene3D Ribonuclease Inhibitor 296 413 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05253 Mepo-Chr3 65837054 65844832 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05253 23 901 Receptor kinase-like Gene Family AT5G01950 57.748 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mepo3g05253 Pkinase 5.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05253 - - gmx:100786467 1398.65