Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05251 ATGCATCTTTCAAAGGGTTGTTGCAAGCATGGGGTTATCTTCATCATCTTATGGTTCTGCTGCTGTTTGATACCGGCTGCGGCGCAAGTTATCAATGTCACTGACCCTACTGAAGGTCTGGAACTACTGAAATTGAACTTGTCTGGAAAATTGGCACCAGAAATTGGCAACTTAGGTTATTTGAAAATATTGGATTTCATGTGGAACAACATAAGTGGGACAATTCCTGTGGAAATTGGCAATATCAAATCCTTGGAACTCTTGTTCCTAAGTGGAAATGAATTAACAGGACCAGTGCCAGATGAACTTGGCTTTCTTCCAAATCTACGTATAATGCAAATTGATGAAAACAAATTATCAGGACCTATACCTTCATCATTTGCAAATTTGAACAAGACAAAGCATTTTCACATGAACAATAACTCCCTTAGTGGTCAAATTCCAGCAGAACTTTCCAAATTACCAAGCCTTATTCACCTTCTTCTTGACAACAATAACTTATCAGGAATTCTTCCACCTGAGCTATCTGAGATGCAAAACTTGTCTATACTCCAACTTGACAACAATAACTTTGGAGGAAATAGCATTCCAGATTCTTATGCCAACATGTCAAAATTGGTGAAGTTGACCCTTAGGAATTGCAACTTGCAAGGACCAATTCCTGATTTTAGCAAGATACCACATCTCCTTTATATTGACCTCAGCTTCAATCAGCTGAGTGAATCAATTCCTCTTAATAAGCTTGGTGAAAATATCACAACCATTATTTTATCAAACAACAATCTTACTGGAACTATTCCATCCTATTTTTCTAATCTTCCACGTCTCCAGAAATTGTCACTTGCAAACAATTTATTGAGTGGAAGTGTTCCTTCCAACATTTGGCAGAACAAGATTTCAAATGCTGCTGAAATATTGCAATTAGAGTTGCAAAATAACCAATTTATAAACATATCAGGCAATACTAATCTTCCACCAAATGTCACACTCTTGCTTGATGGGAATCCTTTATGCTCAGATAACACACTGAATCAGTTTTGTAAAGTTGAAGGAGCTAGTATTGACACAAATGGCACATCTCCGACAAACTTCAGTGACCCTTGTCCCACTAAAAAATGTCCGCCTCCTTATGAATACTCGGTGAATTGTTTCTGTGTGGCTCCATTGATTTTTGGTTATCGACTGAGAAGTCCTGGTTTTTCATATTTCCCCCCATATTTCAATACTTTTGAGGAGTACTTGTCTTCTAATCTTAAGATACATCCCAATCAAATAAGCTATACGTTTGAGTGGCAAGTAGGACCTCGAATCCTAATGATCTTGAAGTTTTATCCTGAATATGTTGACGACAATAGTTCTCATACTTTCAATACAAGCGAGGTCCAACGGATCAGAAACATGTTCACTGGATGGACCATTCCTAACCGTGATTTGTTTGGGCCTTATGACCTTATGGATCCTGTTCCTTATAATAATGGGACTGACACCTCTTCTAAATCAGGCATAAGCACGGGTGCATTGGTTGGTATAATCTTAGGCTCAATTGCGTGTGTAATTTCGATGTCTGCAATTTTTATTCTTTTAATCTTAAGAGTAAGATTAAGACGTCATGATGCAGTTTCCAAACCACGTCATTCATCTAGGATATCAATGCAAATTGATGGGACAAGGGCCTTTACTTATGAAGAATTGTCTTCTGCTACAAGAAATTTTGACAACAATGCTCAAATTGGACAAGGAGGCTATGGAAAGGTATATAAAGGTATTCTTTTGAATGGGAATGTGGTTGCCATAAAACGTGCACAACAAGGATCACTGCAAGGTGAGAAGGAGTTTCTTACAGAAATATCAATACTATCAAGGATACATCACCGTAACCTTGTAGCTTTGATTGGATATTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGCCGAATGGCACACTAAGGGATCACCTTTCTGTTACATCAAACAAACCTTTGACTTTTGCTATGAGATTGAAGATAGCATTAGAGTCGGCTAAAGGTCTCATGTATCTACACACAGAAGCTGATCCTCCAATATTTCACCGAGATGTTAAGTCCAGCAACATATTATTGGACTCTAAGTTCACTGCAAAAGTGGCAGATTTTGGACTTTCACGACTTGCACCGGTTCCAGATATGGAAGGAATTGTTCCTGGTCATGTATCTACTGTGGTAAAGGGTACACCGGGTTACCTTGATCCAGAGTACTTCTTAACTCACACATTAACCGACAAGAGTGATGTTTATAGTCTCGGCGTTGTGTTTTTGGAACTTTTGACTGGGATGCAACCTATCACACATGGAAAAAATATTGTTAGAGAGGTTAGTGTTGCATATGAATCGAGCGAGATATCATCGTTTATTGATGAACGCATGGGGTCTTATCCATTTGAGCATGCAGAGAAGTTTTTAAATTTGGCCCTAAAGTGTTGCGAAGATGAGCCAGAGCCGCGTCCTAAAATGGCAGAAGTGGTTAGAGAACTTGAAAATATTTGTTTTGTGATGTCAGATTCAGATACCATGAGAGATGCATCTACAAGCAGTGGTGGCAAAACAGTTAGTTTTGTAAGCAGTACAACTTCTTCATCCTCAGCCTCAGCCATAAATACTACTTTTGTATCAAGAAATGTATAA 2670 0.3839 MHLSKGCCKHGVIFIILWFCCCLIPAAAQVINVTDPTEGLELLKLNLSGKLAPEIGNLGYLKILDFMWNNISGTIPVEIGNIKSLELLFLSGNELTGPVPDELGFLPNLRIMQIDENKLSGPIPSSFANLNKTKHFHMNNNSLSGQIPAELSKLPSLIHLLLDNNNLSGILPPELSEMQNLSILQLDNNNFGGNSIPDSYANMSKLVKLTLRNCNLQGPIPDFSKIPHLLYIDLSFNQLSESIPLNKLGENITTIILSNNNLTGTIPSYFSNLPRLQKLSLANNLLSGSVPSNIWQNKISNAAEILQLELQNNQFINISGNTNLPPNVTLLLDGNPLCSDNTLNQFCKVEGASIDTNGTSPTNFSDPCPTKKCPPPYEYSVNCFCVAPLIFGYRLRSPGFSYFPPYFNTFEEYLSSNLKIHPNQISYTFEWQVGPRILMILKFYPEYVDDNSSHTFNTSEVQRIRNMFTGWTIPNRDLFGPYDLMDPVPYNNGTDTSSKSGISTGALVGIILGSIACVISMSAIFILLILRVRLRRHDAVSKPRHSSRISMQIDGTRAFTYEELSSATRNFDNNAQIGQGGYGKVYKGILLNGNVVAIKRAQQGSLQGEKEFLTEISILSRIHHRNLVALIGYCDEEGEQMLVYEFMPNGTLRDHLSVTSNKPLTFAMRLKIALESAKGLMYLHTEADPPIFHRDVKSSNILLDSKFTAKVADFGLSRLAPVPDMEGIVPGHVSTVVKGTPGYLDPEYFLTHTLTDKSDVYSLGVVFLELLTGMQPITHGKNIVREVSVAYESSEISSFIDERMGSYPFEHAEKFLNLALKCCEDEPEPRPKMAEVVRELENICFVMSDSDTMRDASTSSGGKTVSFVSSTTSSSSASAINTTFVSRNV 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05251 889 SUPERFAMILY Protein kinase-like (PK-like) 545 841 IPR011009 -
Mepo3g05251 889 Pfam Protein kinase domain 573 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05251 889 Gene3D Transferase(Phosphotransferase) domain 1 647 859 - -
Mepo3g05251 889 Gene3D Ribonuclease Inhibitor 249 341 IPR032675 -
Mepo3g05251 889 Gene3D Ribonuclease Inhibitor 20 100 IPR032675 -
Mepo3g05251 889 Gene3D Ribonuclease Inhibitor 101 149 IPR032675 -
Mepo3g05251 889 Pfam Leucine rich repeat 107 167 IPR001611 GO:0005515
Mepo3g05251 889 SUPERFAMILY L domain-like 37 359 - -
Mepo3g05251 889 CDD STKc_IRAK 577 843 - -
Mepo3g05251 889 SMART serkin_6 571 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05251 889 PANTHER RECEPTOR-LIKE PROTEIN 55 38 843 - -
Mepo3g05251 889 FunFam Leucine-rich repeat receptor protein kinase EMS1 124 223 - -
Mepo3g05251 889 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 647 857 - -
Mepo3g05251 889 Gene3D Phosphorylase Kinase; domain 1 542 646 - -
Mepo3g05251 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 691 703 IPR008271 GO:0004672|GO:0006468
Mepo3g05251 889 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 123 - -
Mepo3g05251 889 SMART LRR_typ_2 154 178 IPR003591 -
Mepo3g05251 889 SMART LRR_typ_2 273 297 IPR003591 -
Mepo3g05251 889 SMART LRR_typ_2 226 251 IPR003591 -
Mepo3g05251 889 SMART LRR_typ_2 106 129 IPR003591 -
Mepo3g05251 889 FunFam Leucine-rich repeat protein kinase family protein 535 646 - -
Mepo3g05251 889 Gene3D Ribonuclease Inhibitor 150 248 IPR032675 -
Mepo3g05251 889 ProSiteProfiles Protein kinase domain profile. 571 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05251 889 ProSitePatterns Protein kinases ATP-binding region signature. 577 599 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05251 Mepo-Chr3 65814684 65824650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05251 40 852 Receptor kinase-like Gene Family AT5G01950 55.206 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mepo3g05251 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05251 - - gmx:100786467 1194.87