Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05248 ATGAAGACCAACAAAGTTCACTCTAAATTTATGTCCATGAAGTTGTATTCTGCTTCAGCGGCTTCTTTCCTTTTTGGCATAGCAATTATTTTCCCTCTTGCTATTGCCGATCTTAATTCCGATAAGCAAGCCCTTCTTGATTTTATCAATGCTGTGCCGCACCGTAAAAACTTGATGTGGAATCCATCCACCTCAATCTGTACAACTTGGGTTGGCATCACTTGCAGTGAAGATGGAACTCGAGTTGTTAATGTCCGGCTCCCTGGAGTTGGACTAATTGGCTCCATCCCATCAAATACACTCGGAAAGCTTGATGCTGTGAAAATTATTAGCCTTCGCTCCAACCTACTTGGTGGCAACCTACCTGCTGACATTGCTTCTCTTCCGTCTCTTCAGTATCTCTACCTCCAACATAATAACTTTTCCGGTGATATTCCTACCTCGTTGTCACCCCAACTAATTGTACTTGATTTGTCTTATAATTCTTTCGCCGGCAGAATTCCGAAGACATTACAGAATTTGACTGAACTAAGTAGTCTGAATCTCCAGAACAACTCCCTATCTGGAAGCATACCCAATCTCAATGTCACTAAGCTCGGTAATTTGAATTTAAGCTACAACAATTTGAGTGGACCTATCCCTTCAGCACTTCAAGTGTATCCTAATTCGTCATTTGAAGGAAACTCTCGTTTATGTGGACTGCCTCTAAAGCCATGCTTTACGACTCCACCTCCTCCTGCCTTGACTCCTACTCCATCATCCGCACCTGGAAAACAAAGCTCCAAAAGTAAATTGAGTAAGGTAGCTATCATAGCCATTGCGGTTGGAGGAGCCGTATTGCTATTTTTCATAGTTCTTGTTATTGTTCTATGCTGTTTGAAGAAAGAAGATGACGGTGGTTCAAGAGAAGTTAAAAGGAAGGGTCCTGGTGGCGGCGGCGGTGGTGGCAGGGGTGAGAAGCCGAAAGAAGAGTTTGGGAGTGGAGTGCAAGAGCCTGAGAAAAACAAATTGGTTTTCTTTGAGGGAAGTTCTTATAATTTTGATCTTGAAGACTTGCTTAGAGCTTCAGCAGAAGTTTTGGGGAAAGGTAGCTATGGTACCTCATATAAGGCTATATTGGAGGAGGCAATGACAGTTGTGGTGAAAAGGTTGAAAGAAGTTGTGGTTGGCAAAAAGGAGTTTGATCAGCAGATGGAGATTATGGGAAGGGTTGGACAACATGCAAACGTTTTGCCGCTTCGCGCTTATTATTATTCAAAAGATGAAAAGCTTCTGGTTTATGATTATGTCCCTGCTGGCAACCTTTCCACACTCTTGCATGGCAATCGAACAGGTGGAAGAACTCCATTAGATTGGGACTCGAGAGTAAAAATATCTCTCGGAACTGCAAGAGGAATGGCCCACATCCATTCTGTCGGCGGTCCCAAATTCACACATGGAAATATCAAGTCCTCAAATGTCCTCCTCAACCAAGATAACGACGGCTGCATTTCTGATTTCGGCCTAGCCTCACTTATGAATGTTCCTGCAAACCCTTCTAGAGCTGCAGGTTATCGCGCTCCTGAGGTGATTGAAACCCGTAAGCACACACATAAATCAGATGTCTACAGCTTTGGCGTCCTCCTTCTCGAGATGCTTACAGGGAAAGCACCTCTCCAATCTCCTGGACGCGACGATATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTCGTTCGGGAGGAGTGGACAGCCGAGGTTTTCGATGTTGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGCTGCAAATTGCCATGGCTTGTGTAGCAAAGATGCCTGATATGAGACCTAACATGGATGAAGTGGTGAAAATGATCGAAGAGATCCGGCAATCTGACTCAGAGAACCGTCCATCTTCCGAAGAGAATAAATCTAAGGACTCAAATGTTCAAACTCCATAA 1950 0.4405 MKTNKVHSKFMSMKLYSASAASFLFGIAIIFPLAIADLNSDKQALLDFINAVPHRKNLMWNPSTSICTTWVGITCSEDGTRVVNVRLPGVGLIGSIPSNTLGKLDAVKIISLRSNLLGGNLPADIASLPSLQYLYLQHNNFSGDIPTSLSPQLIVLDLSYNSFAGRIPKTLQNLTELSSLNLQNNSLSGSIPNLNVTKLGNLNLSYNNLSGPIPSALQVYPNSSFEGNSRLCGLPLKPCFTTPPPPALTPTPSSAPGKQSSKSKLSKVAIIAIAVGGAVLLFFIVLVIVLCCLKKEDDGGSREVKRKGPGGGGGGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTSYKAILEEAMTVVVKRLKEVVVGKKEFDQQMEIMGRVGQHANVLPLRAYYYSKDEKLLVYDYVPAGNLSTLLHGNRTGGRTPLDWDSRVKISLGTARGMAHIHSVGGPKFTHGNIKSSNVLLNQDNDGCISDFGLASLMNVPANPSRAAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKMPDMRPNMDEVVKMIEEIRQSDSENRPSSEENKSKDSNVQTP 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05248 649 Pfam Leucine rich repeat N-terminal domain 39 76 IPR013210 -
Mepo3g05248 649 CDD STKc_IRAK 360 625 - -
Mepo3g05248 649 Pfam Leucine Rich Repeat 153 174 IPR001611 GO:0005515
Mepo3g05248 649 FunFam Leucine-rich repeat receptor-like protein kinase 151 239 - -
Mepo3g05248 649 MobiDBLite consensus disorder prediction 623 649 - -
Mepo3g05248 649 PANTHER OS05G0588300 PROTEIN 25 637 - -
Mepo3g05248 649 MobiDBLite consensus disorder prediction 299 329 - -
Mepo3g05248 649 MobiDBLite consensus disorder prediction 623 640 - -
Mepo3g05248 649 SUPERFAMILY L domain-like 40 238 - -
Mepo3g05248 649 ProSiteProfiles Protein kinase domain profile. 354 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05248 649 SUPERFAMILY Protein kinase-like (PK-like) 358 632 IPR011009 -
Mepo3g05248 649 ProSiteProfiles Leucine-rich repeat profile. 176 198 IPR001611 GO:0005515
Mepo3g05248 649 FunFam Leucine-rich repeat receptor-like protein kinase 40 150 - -
Mepo3g05248 649 Gene3D Ribonuclease Inhibitor 39 152 IPR032675 -
Mepo3g05248 649 Gene3D Transferase(Phosphotransferase) domain 1 430 648 - -
Mepo3g05248 649 Pfam Protein kinase domain 357 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05248 649 Gene3D Ribonuclease Inhibitor 153 239 IPR032675 -
Mepo3g05248 649 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 430 637 - -
Mepo3g05248 649 FunFam pollen receptor-like kinase 1 322 429 - -
Mepo3g05248 649 Pfam Leucine rich repeat 93 141 IPR001611 GO:0005515
Mepo3g05248 649 Gene3D Phosphorylase Kinase; domain 1 322 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05248 Mepo-Chr3 65737753 65742035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05248 12 647 Receptor kinase-like Gene Family AT5G58300 67.030 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo3g05248 Pkinase 2.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05248 - - gmx:100796171 1015.37