Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05239 ATGGATTATAGATCAGGGGATGTTGATAGATTAACAGAACTTCAATTTGGGAAGATTGTTCATACTACTGCTGGAAATAAGATGGCGAGTTTTCTGACTGATTTGGCGAAACCCTATGTGGAGAAATTGATAAATGGGGCAATCGCAGAGACAGGTTATATATGTTGCTTTACGCACATTGCTAATGATTTTGAAGAAGAAAGAGTTGGGTTTGAAAGAGATAGGACAACTGTCAAGGAACTTGTTGATCAGGCAATCAGAAGAGGAGACAGTGTTCAAGGTAATGTCCGTTCATGGGAAAAAGAAGCTGATGAGCTCATTCAAGAAGATACCAAAGCAAAACAAAAATGTCTTTTTGGATTTTGTCCCGATTGCATATGGCGATATAGAAGGGGAAAGGATCTGGCAAATAAGAAGGAGAAAATTAAAAAATTAATTGAAACTAGAAAGGATCTTGTAATTGGACTCCCTGCTCATCTTCCAGATGTTGAACGTTATTCATCCAAACACTATATTTCTTTTGAAAGTAGGGAATTCAAATACAAAGAGCTTTTGGATGCATTGAAAGATGACAACAATTACATAACCGGGTTGCAAGGGATGGGGGGCACAGGAAAAACTACATTGGCCAAAGAAGTTGGTAAGGAACTTAAGCAATCCAAACAATTTACTTACGTCATCGATACAACAGTGTCATTGTCTCCTGATATCAGAAAGATTCAAGATGATATTGCTGGACCCTTGGGATTGAAATTTGACGACTGTAGTGAATCAGACCGACCCAGAAAACTATGGAGTAGATTAACCAATGAAGGTAAGATTGATCAAACCGAGGAAAAGAAAATTCTTCTGATATTGGATGATGTGTGGGATGTTATCGATTTTGATAAAATAGGGATTCCTGACAATCACAAAGACTGTAGAATTCTTATAACCACGCGCAATCTCTCTGTCTGCAACAGATTAGGATGCAATAAGACAATCCAACTGAAGGTCTTATCTGATGAAGAAGCATGGACCATGTTCCAAAGGTGTGCTGGTCTAAAAGAAAAGTCACCTAAAATTTTGCTCGACAAGGGCTGTAAAATTGCAAATGAATGCAAAGGGTTACCAATTGCAATTGCTGTTATCGCCAGTAGTTTAAAGGGCATACAACATCCGGAAGAGTGGGATGGGGCCTTAAAATCCTTGCAGAAACCCATGCACGGTGTTGATGATGAACTTGTTAAAATTTATAAACTCCTGCAAGTTAGCTATGATAATATGAAGAATGAGAAGGCCAAGAGACTATTGCTTTTGTGTTCTGTATTTCAAGAAGATAAAAAAATACCTACCGAAAGGTTAACCAGACTTGGCATCGGAGGAGGCATTTTTGGGGAAGGTTATGTCAGCTATGAAGATGCTCGAACTCAAGTTGTTATATCCAAAAATAAACTCATAGATTCTTGTTTGTTGTTGGAGGCCGATCAAAACAGAGTGAAAATGCATGACTTGGTTCGTGATGCAGCCCAATGGATAGCGAACAAAGAGATTCAAACAGTGAAGTTGTATGATTAA 1557 0.3834 MDYRSGDVDRLTELQFGKIVHTTAGNKMASFLTDLAKPYVEKLINGAIAETGYICCFTHIANDFEEERVGFERDRTTVKELVDQAIRRGDSVQGNVRSWEKEADELIQEDTKAKQKCLFGFCPDCIWRYRRGKDLANKKEKIKKLIETRKDLVIGLPAHLPDVERYSSKHYISFESREFKYKELLDALKDDNNYITGLQGMGGTGKTTLAKEVGKELKQSKQFTYVIDTTVSLSPDIRKIQDDIAGPLGLKFDDCSESDRPRKLWSRLTNEGKIDQTEEKKILLILDDVWDVIDFDKIGIPDNHKDCRILITTRNLSVCNRLGCNKTIQLKVLSDEEAWTMFQRCAGLKEKSPKILLDKGCKIANECKGLPIAIAVIASSLKGIQHPEEWDGALKSLQKPMHGVDDELVKIYKLLQVSYDNMKNEKAKRLLLLCSVFQEDKKIPTERLTRLGIGGGIFGEGYVSYEDARTQVVISKNKLIDSCLLLEADQNRVKMHDLVRDAAQWIANKEIQTVKLYD 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05239 518 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 62 510 - -
Mepo3g05239 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 434 IPR027417 -
Mepo3g05239 518 Coils Coil 96 116 - -
Mepo3g05239 518 PRINTS Disease resistance protein signature 367 381 - -
Mepo3g05239 518 PRINTS Disease resistance protein signature 195 210 - -
Mepo3g05239 518 PRINTS Disease resistance protein signature 276 290 - -
Mepo3g05239 518 Pfam NB-ARC domain 184 421 IPR002182 GO:0043531
Mepo3g05239 518 Gene3D - 419 505 IPR036388 -
Mepo3g05239 518 Gene3D - 332 418 IPR042197 -
Mepo3g05239 518 FunFam Probable disease resistance protein At1g61300 159 327 - -
Mepo3g05239 518 Gene3D - 160 329 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05239 Mepo-Chr3 65606504 65610587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05239 196 515 WRKY Transcription Factor Family AT5G45050 25.602 2.75e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05239 - - mtr:11438060 738.028