Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05215 ATGCAAGATCCCAATGCACCTTCTTCCAACGTCTTCATCCGTGGCAGCGTCAACGGCGTCTCCACCACCGTCACCGTCGCCGGCGAACCCCACTCTCACCACCGTCGCTCCCACTCCGAAATCAACTACCGTCTCCCCGACGACATCATGGACCTCTCCTCTTCCGATCCCTTAACCGGCGGCGGATCCTCCACCGCCAGCCTCGACGAGATCGGATCCGAAGACGATCTCTTCTTCACCTACATTGACGTTGAGAAGCTCGGTGGTGTAACAAACGGTTCGAATTCGAATCAGAACGGTTACGGTCATTGCGCCGGTGCCGGTGCCGGAACGAGTGGTAATAACGACGGAGAGAAGAGTGGGAATGATGTTACGACGCCGAGAACGAGGCATAGGTATAGCTGTTCTGTTGATGGATCAATGTCGACGACGAATATGTTTGGTGAGATCATGGATGCGAAGAAAGCTATGCCTCCTGATAAACTCGCTGAGCTTTGGACTATTGATCCAAAACGTGCTAAGAGAATACTTGCAAACCGGCAATCTGCTGCACGTTCAAAGGAGAGAAAGGCCCGCTATATACAAGAGCTTGAGCGCAAGGTTCAGACCCTTCAAACAGAGGCTACAACTCTCTCCACCCAATTGACATTATACCAGAGGGACACAACTGGTCTGAGTACGGAAAATACCGAGCTCAAGCTCCGTCTGCAATCCATGGAACAACAGGCACACCTTCGAGATGCTCTTAATGATGCATTGATGAAGGAAGTTGATAGGCTTAAGATTGCTACCGGGGAGGCAATGAACCCTTCTGAATCTTATAATATGGGAATGCACCAGATGCAATTTGCAGGGTCAAATTTATTTTCAATGCCACAACATTTAGGCCCTTCGGGTCACCAGAACATGCAATTTCCCCAATTTGGCCACTCCCCATCTGACGTGCCAAATTATCAGTTGCAACAAATCAATTCTCTCCAAATCTCAGATATGTTGCAAAACGATCAGCTCGGTCGTTTGCAGGGGCTTGACATCAGTAGCAAAGGAACAACCCTCGTGAAATCTGAAGCCCCCTCAATCTCTGCAAGTGAGAGTAGCACTACATTTTGA 1110 0.4955 MQDPNAPSSNVFIRGSVNGVSTTVTVAGEPHSHHRRSHSEINYRLPDDIMDLSSSDPLTGGGSSTASLDEIGSEDDLFFTYIDVEKLGGVTNGSNSNQNGYGHCAGAGAGTSGNNDGEKSGNDVTTPRTRHRYSCSVDGSMSTTNMFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSTQLTLYQRDTTGLSTENTELKLRLQSMEQQAHLRDALNDALMKEVDRLKIATGEAMNPSESYNMGMHQMQFAGSNLFSMPQHLGPSGHQNMQFPQFGHSPSDVPNYQLQQINSLQISDMLQNDQLGRLQGLDISSKGTTLVKSEAPSISASESSTTF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05215 369 Coils Coil 187 214 - -
Mepo3g05215 369 CDD bZIP_plant_RF2 172 221 IPR044759 GO:0003700|GO:0006355
Mepo3g05215 369 SMART brlzneu 167 231 IPR004827 GO:0003700|GO:0006355
Mepo3g05215 369 FunFam probable transcription factor PosF21 170 223 - -
Mepo3g05215 369 SUPERFAMILY Leucine zipper domain 171 222 IPR046347 GO:0003700|GO:0006355
Mepo3g05215 369 Gene3D - 170 223 - -
Mepo3g05215 369 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 169 232 IPR004827 GO:0003700|GO:0006355
Mepo3g05215 369 MobiDBLite consensus disorder prediction 113 137 - -
Mepo3g05215 369 MobiDBLite consensus disorder prediction 110 137 - -
Mepo3g05215 369 Pfam bZIP transcription factor 171 226 IPR004827 GO:0003700|GO:0006355
Mepo3g05215 369 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 10 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05215 Mepo-Chr3 65224975 65228224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05215 1 369 bZIP Transcription Factor Family AT2G40620 47.772 9.99e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo3g05215 bZIP_1 5.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05215 - - gmx:100790732 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05215 3 65224975 65228224 Mepo3g05215 3 65224975 65228224 ECH
Mepo3g05215 3 65224975 65228224 Mepo7g01968 7 29900426 29904287 PCT