Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05213 ATGAACGAAAACATTTCAAACTGGATAATGGAATTCCTCCTCCGTAACACCACCGTCCCCGATCCCCTAATTCAAAAAACCCTAACCCTACTTCCACTCTCCGGCGCCGATTCCCGTCTCAAAAAAACCCTCCTCCTCCGCGTTCTTCAAACTCACATCCTCAACGCTTCAATCTCCGAAGCCTCTCTCCAAATCCTCGAACATTTGGAAGAGATTTACCGCGACGACGGAGTTTCCATCTCGAATGCGATGCGGAGTGCTTACTGTGCTGTTGCGGTGGAATGTACGGTGAAGTATTTGATTAATTCGCCGGAGGATCCGTCTGGGGAGTATTTTTCGGCGGTGAGGAGGATTTGGAGGGGAAGGAGAGGGAGTGGGTTGGTGTCGGATGGGTTTGTGCAGTGGGGGGAAGAGATTGAAGGTGCGCTTTGGGATGTTAGGGTTGCGGAGAGGTTGGTGGGGTTGAATACGAGGAGAGATGCGGTTGTTGAAGTGAAGAGGTTTTTGAAGGAAGCGTGGGGGAGTATGGGGGATTCGTTTCTTGATTTGATTGCGATGGTTTCGAATGGGAATGGTTTGTGTCCGGGAGGTGTTTGTGAAAATGCTGCTGAGGGGAGTAGAAGGTTGTTAGAAGGTTTGGGGAAAGAGAAAGTGAATGATGATGTTGATGATGATGTAGCAATGGGTGAAAATCATGGTAATCGGCAATTGGAAGAGAATGGTTCGGGTGGTGGAATGTCGAGAAGGCGTGATGGGAGGTTAGAAGGTTTGGGGAAAGAGAAAATGAATGATGATGGTGATGATGAGAATGGTAATGTGAATGATATTGTTGATGATAGTGATGATGAGACAGTGATGGGTGAAAATCATCGCAATGATGAGTCGGAAGAAAGAGTTGGTACTTCTGTTGATGCGAATCAGCAAGTGGAACAGCAAGCTGGTACTTCTAGAATGGGAGATAAAGGTGTTTGTGAAATTGCTGAAGGGCGTGAAGATTTAAGGGAGCGTGATGGGATGTTAGAAGGTTTGGGAAAGGAGAAAATGAACGATGATGGTGATGATGAGAATGATAATGATAATGATAATGTTGATGGTGACGATGATGTAACATTGATGGATGGAAATCGTGGCAATGAACAATTGGAAGCGAGAGTTCGCACTTCTGGAATGAGAGATAAAGAAATTCGGAGAGACAATGGTCAGCTCAAACGCAAGCACTCTGCAATACAAACAAGACACAGGGGAGTTAAACTCTCTGGTGATGAGGAAGCGAGGCCGATAAATTTTTCGACTAAATATGAAAATCTGCGTAGTGCTGATGTGAAGAAACTTCGGGAGTCCCTTAAATCAAGTTCTTTGGAGCTAAAAGCATTGGTCAAAGATCCTCTTCCTGATGCATTGCACACATCTGAAGCCGTAAGATCCAAATTGGCTACAAAAGATATAAATCGCAGGCCAGCCAGTGAAAAGCAGAGTGAACATGTAGATGCACGAGATTCAGATGCATGCAAGACTATTGTACCATATCAGCCTAATGATGCCAATTTTGCCAAGGAGCCTTCTGTTCCTTGTAGTAGTGGTCGCCCTAACTGTAGTAATGGTAGTCGCCCCAACTATAGTAATGATCGTCGCCCCAACTTAATGCGACGGGCAAGCTATGCTCAAACATACGAGTGGGATGATTCAATAGAGAACTTACCGCAACAAAGTCAGCCAAGAAGGAAGAAAAGGAAATGGACTTCCTTGGAAGAAGAGACACTAAGGGCTGGTGTAAGAATGTTTGGAGAAGGAAACTGGAGGACAATCCTAGACTTTTACAGCAACATATTTGAATATCGAAATGGAGTTGATCTGAAGGACAAGTGGAGAAATATGATGCGGTGA 1884 0.4501 MNENISNWIMEFLLRNTTVPDPLIQKTLTLLPLSGADSRLKKTLLLRVLQTHILNASISEASLQILEHLEEIYRDDGVSISNAMRSAYCAVAVECTVKYLINSPEDPSGEYFSAVRRIWRGRRGSGLVSDGFVQWGEEIEGALWDVRVAERLVGLNTRRDAVVEVKRFLKEAWGSMGDSFLDLIAMVSNGNGLCPGGVCENAAEGSRRLLEGLGKEKVNDDVDDDVAMGENHGNRQLEENGSGGGMSRRRDGRLEGLGKEKMNDDGDDENGNVNDIVDDSDDETVMGENHRNDESEERVGTSVDANQQVEQQAGTSRMGDKGVCEIAEGREDLRERDGMLEGLGKEKMNDDGDDENDNDNDNVDGDDDVTLMDGNRGNEQLEARVRTSGMRDKEIRRDNGQLKRKHSAIQTRHRGVKLSGDEEARPINFSTKYENLRSADVKKLRESLKSSSLELKALVKDPLPDALHTSEAVRSKLATKDINRRPASEKQSEHVDARDSDACKTIVPYQPNDANFAKEPSVPCSSGRPNCSNGSRPNYSNDRRPNLMRRASYAQTYEWDDSIENLPQQSQPRRKKRKWTSLEEETLRAGVRMFGEGNWRTILDFYSNIFEYRNGVDLKDKWRNMMR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05213 627 CDD SANT_TRF 577 627 - -
Mepo3g05213 627 MobiDBLite consensus disorder prediction 343 379 - -
Mepo3g05213 627 SUPERFAMILY Homeodomain-like 572 626 IPR009057 -
Mepo3g05213 627 MobiDBLite consensus disorder prediction 525 542 - -
Mepo3g05213 627 Gene3D - 568 627 - -
Mepo3g05213 627 PANTHER MYB TRANSCRIPTION FACTOR 1 627 - -
Mepo3g05213 627 MobiDBLite consensus disorder prediction 283 300 - -
Mepo3g05213 627 MobiDBLite consensus disorder prediction 477 501 - -
Mepo3g05213 627 MobiDBLite consensus disorder prediction 214 305 - -
Mepo3g05213 627 MobiDBLite consensus disorder prediction 352 368 - -
Mepo3g05213 627 Coils Coil 441 461 - -
Mepo3g05213 627 SMART sant 575 627 IPR001005 -
Mepo3g05213 627 MobiDBLite consensus disorder prediction 477 545 - -
Mepo3g05213 627 MobiDBLite consensus disorder prediction 399 419 - -
Mepo3g05213 627 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 571 627 IPR017930 -
Mepo3g05213 627 MobiDBLite consensus disorder prediction 214 232 - -
Mepo3g05213 627 Pfam Myb-like DNA-binding domain 576 625 IPR001005 -
Mepo3g05213 627 MobiDBLite consensus disorder prediction 244 268 - -
Mepo3g05213 627 ProSiteProfiles Myb-like domain profile. 571 626 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05213 Mepo-Chr3 65210596 65216724 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05213 579 626 Single Myb Histone (SMH) Gene Family AT1G15720 47.917 2.47e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo3g05213 Myb_DNA-binding 4.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05213 - - mtr:25491076 1100.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05213 3 65210596 65216724 Mepo3g05213 3 65210596 65216724 ECH