Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05143 ATGATCATGGAATTGAGCATCCTTTGTGGTATGAATGCTTGTGCAATCATTTTTGATGAAAAAAGTCATGAAGCTGAGGTTTGGCCTTCTCCAACTGGAGTAGTTAGTGTGTTGTCAAGGTTCTCGAATTTGTCCAAACATGCAAAAAGAAAAAGGATGCTGGATTTAGAGAGTTTCTTGAAACAACAAATCAAGAAAGCTCAAGATCAGTATAACAAACTAAAGGTGGAAAACAAGAAGAAAGAAATGGCTGAATATATAAACAAATATATGTGTGCCACTGAATTTAATTTTGATGATGCTCACTTGACCAATCCTATTGATCTTACGGACTTTATTAATAATCAATTGAAGGAAATCAAGCAAAGGTTAGATTCAATGGATTTCCAAGCTCAAGAGGATTCAATGGATTTTGATGATATTGATTTCGATCCAAATGAATTTCTACTCCATAATTATGCAAAAAACTTAGGCTCTATTTGGTTATATTTGTAA 495 0.3313 MIMELSILCGMNACAIIFDEKSHEAEVWPSPTGVVSVLSRFSNLSKHAKRKRMLDLESFLKQQIKKAQDQYNKLKVENKKKEMAEYINKYMCATEFNFDDAHLTNPIDLTDFINNQLKEIKQRLDSMDFQAQEDSMDFDDIDFDPNEFLLHNYAKNLGSIWLYL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05143 164 SUPERFAMILY SRF-like 3 66 IPR036879 GO:0003677|GO:0046983
Mepo3g05143 164 Coils Coil 57 84 - -
Mepo3g05143 164 Gene3D - 1 68 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05143 Mepo-Chr3 64389638 64390132 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05143 2 125 Type I MADS-box Gene Family AT5G48670 37.008 5.46e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05143 - - mtr:11405677 238.81