Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05142 ATGACCTCCTCTTTCTTCTCTGACCTCCTTAATTCTCCAACCGACCAAAACCTTAAAGACACCGAAAGATCTCATCATCAAGTGTTGTCGGATCAAAACAGGTTGGGTTTACCCCCCAAATTCAAGTCTACACCTCCTCCATCTCTTCCTCTTTCTCCTACACCTCTCTTTTCTCCTTCTTCTTATTTTTCGATACCTCCTGGTTTCTCTCTTTCTGAACTTCTTGACTCTCCTGTTCTCCTTAACTCTTCTCATATTCTTCCATCTCCAACCACTGGATCATTTGCTAATAATCAAGGCTTCAATTGGAAGAATAATTATGAGGAAAAGCAAGAGAATGTCAAGGCAGAAGAGGAAACCATCTCATCAAGTTTCTCCTTCCAAGCTCAACCAGCTGGGTTTCAATCTTCGACCACCACGCTTCAAAATGGATGGAACATGGTGAAAACTGAAAACACTTCTTCAAAGCAAAGTTTCACTCCAGAGAGTAATTCTACTAGTGAACAAAATAACTACAACAACAATGGTTCACAATCAAATTACAACAATTATCAATCACAGCCACAAGTTCAGATCCTTAGTAGAAGATCAGATGATGGATACAATTGGAGAAAATATGGACAAAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGCTATTACAAATGCACATACCCTAATTGTCCAACAAAGAAAAAAGTTGAGAGGGGTTTGGATGGACAAATTACTGAGATAGTTTACAAAGGTAGTCATAATCATCCAAAGCCTGTGGCTAACAAGAGGAACACAAACTTGATGTCTTCATCGTCGTCGTCACTTGCAAATCCTCCTCCTTCAAGTCATTTTGGAAATGAAATTCAAATGGATTTGGTTGCTACACCGGAGAATTCATCGATATCCGTTGGAGATGATGAATTTGAGCAGACTTCTCATAAATCTGGTGGAGATCATGATCAGTTTTGTGAAGATGAACCTGATGCCAAAAAATGGAGAATAGAAGGTGAAAATGAGGGGATATCATTAGGAGTTGGAAATAGAACAGTGAGGGAACCTAGAGTTGTTGTTCAAACAACAAGTGACATTGATATTCTAGATGATGGATACAGATGGAGGAAATATGGGCAGAAAGTAGTGAAGGGAAATCCAAATCCAAGGAGTTACTACAAGTGCACAAACCCAGGATGTCCAGTGAGAAAACATGTCGAACGAGCCTCACAAGACCTAAGAGCAGTGATAACAACGTATGAAGGAAAACACAATCATGATGTTCCTGCACCACGTGGAAGTGGAAACCACTCTATCAACAAACCACTACCAATGCAAACAATGAACAACACCAACAATTCCATCAACAACAATTCACTTGATAATGGATTCTTCAACCATGAGATGATGCAGAATAATGGATTCACGGTGGATTCTTACATGAATATGAATCAACAACGTGTTAATAATATTATTAGAGGTAGAGCCAAAGAGGAGCCTGTAGAAGATGACTTGTTTTTTGATTCTTTCTTATCTTGA 1524 0.3898 MTSSFFSDLLNSPTDQNLKDTERSHHQVLSDQNRLGLPPKFKSTPPPSLPLSPTPLFSPSSYFSIPPGFSLSELLDSPVLLNSSHILPSPTTGSFANNQGFNWKNNYEEKQENVKAEEETISSSFSFQAQPAGFQSSTTTLQNGWNMVKTENTSSKQSFTPESNSTSEQNNYNNNGSQSNYNNYQSQPQVQILSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERGLDGQITEIVYKGSHNHPKPVANKRNTNLMSSSSSSLANPPPSSHFGNEIQMDLVATPENSSISVGDDEFEQTSHKSGGDHDQFCEDEPDAKKWRIEGENEGISLGVGNRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASQDLRAVITTYEGKHNHDVPAPRGSGNHSINKPLPMQTMNNTNNSINNNSLDNGFFNHEMMQNNGFTVDSYMNMNQQRVNNIIRGRAKEEPVEDDLFFDSFLS 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05142 507 ProSiteProfiles WRKY domain profile. 198 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g05142 507 MobiDBLite consensus disorder prediction 1 52 - -
Mepo3g05142 507 MobiDBLite consensus disorder prediction 1 17 - -
Mepo3g05142 507 SUPERFAMILY WRKY DNA-binding domain 195 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g05142 507 MobiDBLite consensus disorder prediction 250 284 - -
Mepo3g05142 507 MobiDBLite consensus disorder prediction 305 322 - -
Mepo3g05142 507 SUPERFAMILY WRKY DNA-binding domain 356 424 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g05142 507 Gene3D WRKY domain 351 417 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g05142 507 FunFam WRKY transcription factor 186 257 - -
Mepo3g05142 507 Gene3D WRKY domain 183 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g05142 507 MobiDBLite consensus disorder prediction 296 322 - -
Mepo3g05142 507 MobiDBLite consensus disorder prediction 256 282 - -
Mepo3g05142 507 FunFam WRKY transcription factor 33 351 417 - -
Mepo3g05142 507 ProSiteProfiles WRKY domain profile. 359 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g05142 507 MobiDBLite consensus disorder prediction 152 183 - -
Mepo3g05142 507 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 75 453 IPR044810 GO:0003700
Mepo3g05142 507 SMART WRKY_cls 197 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g05142 507 SMART WRKY_cls 364 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g05142 507 Pfam WRKY DNA -binding domain 198 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g05142 507 Pfam WRKY DNA -binding domain 365 421 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05142 Mepo-Chr3 64375239 64379235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05142 1 506 WRKY Transcription Factor Family AT2G38470 44.465 8.71e-111 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g05142 WRKY 2e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05142 3 64375239 64379235 Mepo3g05142 3 64375239 64379235 ECH
Mepo3g05142 3 64375239 64379235 Mepo7g01919 7 29380192 29382660 PCT