Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05113 ATGGGATCAGGTTCATCACCTTGTGCTTCTTGCAAATTGTTGAGAAGACGTTGCACACAGGAATGTATCTTTGCTCCTTACTTTCCTTCTGATGACCCACGCAAGTTTGCCATTGTTCATAAGGTCTTTGGTGCTAGCAATATCAGCAAAATGCTGCAGGAGCTTCCAATCCATCAAAGAGCAGAAGCAGTGAACAGTTTAGTTTTTGAAGCAAATGCAAGAGTGAGGGATCCTGTTTATGGATGTGTTGGAGCCATATCATACCTTCAAAGTCAAGTTTCACAATTACAAATGCAACTTGCAATGGCTCAATCAGAGATTCTTTGCATCCAGATGCAACAAGACTCTACTGCGGTTACCAACTCATTACCAACACATGTTGATCAAGATGACAAATCGATGCTACTATCTGAAAATAGTAATTGCTATGGTGTTCTTCCACAGTATATTAACTTTCCTTCTTCTTCTTCCTCATCTTCCAATGTATTCCAAGATTATGAGCCTCTTAAGAGAGAGACTTTTTGGACTTAA 531 0.3974 MGSGSSPCASCKLLRRRCTQECIFAPYFPSDDPRKFAIVHKVFGASNISKMLQELPIHQRAEAVNSLVFEANARVRDPVYGCVGAISYLQSQVSQLQMQLAMAQSEILCIQMQQDSTAVTNSLPTHVDQDDKSMLLSENSNCYGVLPQYINFPSSSSSSSNVFQDYEPLKRETFWT 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05113 176 Coils Coil 86 106 - -
Mepo3g05113 176 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Mepo3g05113 176 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Mepo3g05113 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05113 Mepo-Chr3 63991833 63993133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05113 2 176 AS2 family AT2G30130 63.351 6.12e-79 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo3g05113 LOB 1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05113 - - gmx:100819419 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05113 3 63991833 63993133 Mepo3g05113 3 63991833 63993133 ECH